CATH Domain: 1jhjA00 XML data for domain: 1jhjA00

Molscript image for 1jhjA00
1jhjA00
PDB coordinates for domain 1jhjA00

PDB 1jhj, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.260 Galactose-binding domain-like Gene3D
2.60.120.260.16
2.60.120.260.16.1
2.60.120.260.16.1.1
2.60.120.260.16.1.1.1
2.60.120.260.16.1.1.1.1

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Segment boundaries for domain 1jhjA00

Chopping figure for domain 1jhjA00
DomainStart PDB ResidueStop PDB Residue
1jhjA00 2 162

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 2.60.120.260.16.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gqpB00 87.66 Mitotic sister chromatid segregationCyclin catabolic processMeiosis - yeastUbiquitin mediated proteolysisProtein binding 2.60.120.260 188 31 84 3.12 3.69
1w8oA03 84.56 Micromonospora viridifaciensSialidase 2.60.120.260 145 8 83 2.24 2.69
1tvgA00 83.29 Heat shock protein beta-11Homo sapiens 2.60.120.260 136 11 77 2.24 2.89
1k12A00 82.32 FucolectinCalcium ion bindingFucose bindingRegulation of complement activation, lectin pathwayAnguilla anguilla 2.60.120.260 158 8 86 3.45 4.00
3bn6A00 81.10 LactadherinBos taurus 2.60.120.260 158 8 82 3.38 4.09
2qqiA01 80.23 Cell-cell signalingAxon guidanceOrgan morphogenesisPositive regulation of cell proliferationHomo sapiens 2.60.120.260 153 11 83 3.35 4.00
1o59A02 80.08 Allantoicase [EC:3.5.3.4]Purine metabolismSaccharomyces cerevisiaeAllantoicaseAllantoin catabolic process 2.60.120.260 138 13 77 2.70 3.48
2qqiA02 79.11 Cell-cell signalingAxon guidanceOrgan morphogenesisPositive regulation of cell proliferationHomo sapiens 2.60.120.260 154 9 83 3.60 4.33
3k77A00 78.63 DNA repair protein XRCC1Homo sapiensProtein binding 2.60.120.260 152 10 82 3.12 3.78
1o59A01 78.47 Allantoicase [EC:3.5.3.4]Purine metabolismSaccharomyces cerevisiaeAllantoicaseAllantoin catabolic process 2.60.120.260 174 11 82 4.07 4.92
3cihA02 74.75 Bacteroides thetaiotaomicronPutative alpha-rhamnosidase 2.60.120.260 121 6 59 2.71 4.59
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jhjA00
ATPNKTPPGADPKQLERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYA
DYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTP
V
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jhjA00
ATPNKTPPGADPKQLERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYA
DYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTP
VEESSIGKFPR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:07

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"