CATH Domain: 1jhfB00 XML data for domain: 1jhfB00

Molscript image for 1jhfB00
1jhfB00
PDB coordinates for domain 1jhfB00

PDB 1jhf, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.10 Ribbon
2.10.109 Umud Fragment, subunit A
2.10.109.10 Umud Fragment, subunit A Gene3D
2.10.109.10.1
2.10.109.10.1.1
2.10.109.10.1.1.1
2.10.109.10.1.1.1.1
2.10.109.10.1.1.1.1.1

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Segment boundaries for domain 1jhfB00

Chopping figure for domain 1jhfB00
DomainStart PDB ResidueStop PDB Residue
1jhfB00 75 199

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.10.109.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1f39A00 86.50 Repressor protein CIEnterobacteria phage lambda 2.10.109.10 101 26 81 2.59 3.16
3iiqA01 82.08 Protein exportToxin bindingPlasma membraneIntegral to membraneProteolysis 2.10.109.10 115 12 77 2.92 3.77
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jhfB00
GLPLVIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELL
PENSEFKPIVVDLRQQSFTIEGLAVGVIRNG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jhfB00
GLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVT
VKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:46

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"