CATH Domain: 1jflA02 XML data for domain: 1jflA02

Molscript image for 1jflA02
1jflA02
PDB coordinates for domain 1jflA02

PDB 1jfl, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1860 Gene3D
3.40.50.1860.4
3.40.50.1860.4.1
3.40.50.1860.4.1.1
3.40.50.1860.4.1.1.1
3.40.50.1860.4.1.1.1.1

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Segment boundaries for domain 1jflA02

Chopping figure for domain 1jflA02
DomainStart PDB ResidueStop PDB Residue
1jflA01 1 104
1jflA01 214 228
1jflA02 105 213

Structural Neighbourhood (36 entries)

There are 36 matching structural neighberhood comparisons for CATH ID 3.40.50.1860.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 36 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1bykA02 80.68 Specific transcriptional repressor activityLacI family transcriptional regulator, trehalose operon repressorSequence-specific DNA binding transcription factor activityTranscriptionHTH-type transcriptional regulator treR 3.40.50.2300 117 4 76 2.99 3.89
2pjuA02 79.68 Positive regulation of gene-specific transcriptionPropionate catabolism operon regulatory proteinNegative regulation of gene-specific transcriptionEscherichia coli K-12Specific transcriptional repressor activity 3.40.50.10660 88 10 77 3.33 4.32
2iksA01 79.47 LacI family transcriptional regulator, fructose operon transcriptional repressorFructose repressorEscherichia coli K-12 3.40.50.2300 95 9 73 3.61 4.92
2q5cA02 79.03 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.10660 89 10 75 2.58 3.43
2q5cA01 78.57 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.2300 97 12 67 2.59 3.81
3bilA02 78.28 Corynebacterium glutamicumPROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR 3.40.50.2300 136 9 64 2.35 3.63
1jyeA01 77.99 Lactose operon repressorProtein bindingEscherichia coli K-12Cytosol 3.40.50.2300 130 9 60 2.55 4.20
3brsA02 77.63 Ribose transport system substrate-binding proteinBacterial chemotaxisPeriplasmic binding protein/LacI transcriptional regulatorClostridium phytofermentans ISDgABC transporters 3.40.50.2300 134 10 67 3.11 4.58
1b73A01 76.96 Glutamate racemaseAquifex pyrophilus 3.40.50.1860 143 11 60 2.50 4.11
2driA01 76.92 Bacterial chemotaxisABC transportersD-ribose-binding periplasmic proteinRibose transport system substrate-binding proteinMembrane 3.40.50.2300 125 11 61 3.01 4.89
2rgyA02 76.91 LacI family transcriptional regulatorBurkholderia phymatum STM815Transcriptional regulator, LacI family 3.40.50.2300 134 11 66 3.18 4.79
2fepA01 76.82 Bacillus subtilisCatabolite control protein ALacI family transcriptional regulator 3.40.50.2300 133 8 57 2.88 4.97
3lftA02 76.70 Putative ABC transport system substrate-binding proteinStreptococcus pneumoniaePutative uncharacterized protein 3.40.50.2300 137 11 59 2.74 4.58
3bilA01 76.57 Corynebacterium glutamicumPROBABLE LACI-FAMILY TRANSCRIPTIONAL REGULATOR 3.40.50.2300 120 10 64 3.07 4.78
3cs3A02 76.55 Sugar-binding transcriptional regulator, LacI familyLacI family transcriptional regulatorEnterococcus faecalis 3.40.50.2300 135 11 65 3.17 4.81
1jyeA02 76.53 Lactose operon repressorProtein bindingEscherichia coli K-12Cytosol 3.40.50.2300 141 5 64 3.19 4.94
2pjuC01 76.26 Positive regulation of gene-specific transcriptionPropionate catabolism operon regulatory proteinNegative regulation of gene-specific transcriptionEscherichia coli K-12Specific transcriptional repressor activity 3.40.50.2300 100 11 66 2.89 4.38
3c3kA02 76.18 Actinobacillus succinogenes 130ZAlanine racemase 3.40.50.2300 138 9 64 2.60 4.03
3ctpA01 75.86 Alkaliphilus metalliredigens QYMFPeriplasmic binding protein/LacI transcriptional regulator 3.40.50.2300 128 11 58 2.45 4.18
2qu7A02 75.71 Putative transcriptional regulatorStaphylococcus saprophyticus subsp. saprophyticus ATCC 15305 3.40.50.2300 137 13 70 3.16 4.51
2hqbA02 75.71 Transcriptional activator of comK geneTranscriptional activator of comK geneBacillus halodurans 3.40.50.2300 148 8 60 2.48 4.12
1m1nB03 75.65 Nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]Nitrogen metabolismAzotobacter vinelandiiNitrogenase molybdenum-iron protein beta chainMetabolic pathways 3.40.50.1980 106 14 64 2.45 3.81
2hqbA01 75.53 Transcriptional activator of comK geneTranscriptional activator of comK geneBacillus halodurans 3.40.50.2300 130 10 59 2.64 4.46
3ckmA02 75.52 Haemophilus influenzaeUncharacterized protein HI_1655 3.40.50.2300 135 4 62 2.85 4.58
3ce9A01 75.27 Glycerol dehydrogenaseClostridium acetobutylicum 3.40.50.1970 153 12 58 2.74 4.66
1jx6A02 75.22 Vibrio cholerae pathogenic cycleVibrio harveyiAutoinducer 2-binding periplasmic protein LuxPProtein bindingAutoinducer 2-binding periplasmic protein luxP 3.40.50.2300 151 10 60 2.82 4.68
2qaiA00 75.12 Pyrococcus furiosusOxidative phosphorylationV-type H+-transporting ATPase subunit F [EC:3.6.3.14]Metabolic pathwaysV-type ATP synthase subunit F 3.40.50.10580 89 10 63 3.03 4.79
3d8uA02 74.84 Putative transcriptional regulatorVibrio parahaemolyticusLacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor 3.40.50.2300 144 11 63 2.77 4.38
2fepA02 74.12 Bacillus subtilisCatabolite control protein ALacI family transcriptional regulator 3.40.50.2300 140 8 64 2.67 4.15
1yqeA02 73.62 Hypothetical proteinArchaeoglobus fulgidusD-tyrosyl-tRNA(Tyr) deacylase 3.40.50.10700 96 10 71 3.40 4.75
1mioB04 73.53 Nitrogenase molybdenum-iron protein beta chainClostridium pasteurianum 3.40.50.1980 98 12 65 3.11 4.77
3bblA02 73.09 Chloroflexus aggregans DSM 9485LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupGTranscriptional regulator, LacI family 3.40.50.2300 137 9 63 3.17 4.99
1usgA02 72.92 ABC transportersLeucine-specific-binding proteinBranched-chain amino acid transport system substrate-binding proteinEscherichia coli K-12 3.40.50.2300 144 7 62 3.03 4.85
1kq3A01 72.89 Thermotoga maritimaGlycerol dehydrogenase [EC:1.1.1.6]Glycerol dehydrogenaseGlycerolipid metabolismMetabolic pathways 3.40.50.1970 158 8 55 2.65 4.81
1s8nA01 72.83 Response regulator NasTProbable transcriptional regulatory protein pdtaRMycobacterium tuberculosis 3.40.50.2300 132 5 56 2.73 4.87
1rrmA01 72.52 Pyruvate metabolismGlyoxylate and dicarboxylate metabolismL-fucose catabolic processLactaldehyde reductaseEscherichia coli K-12 3.40.50.1970 179 11 51 2.56 4.98
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Displaying entries 1 to 36 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jflA02
EETAKKVKELGFKKAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLGRELLLKTAKILEE
RGAECIIAGCTEVSVVLKQDDLKVPLIDP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jflA02
EETAKKVKELGFKKAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLGRELLLKTAKILEE
RGAECIIAGCTEVSVVLKQDDLKVPLIDP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:56

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"