CATH Domain: 1jflA01 XML data for domain: 1jflA01

Molscript image for 1jflA01
1jflA01
PDB coordinates for domain 1jflA01

PDB 1jfl, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1860 Gene3D
3.40.50.1860.3
3.40.50.1860.3.1
3.40.50.1860.3.1.1
3.40.50.1860.3.1.1.1
3.40.50.1860.3.1.1.1.1

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Segment boundaries for domain 1jflA01

Chopping figure for domain 1jflA01
DomainStart PDB ResidueStop PDB Residue
1jflA01 1 104
1jflA01 214 228
1jflA02 105 213

Structural Neighbourhood (31 entries)

There are 31 matching structural neighberhood comparisons for CATH ID 3.40.50.1860.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 31 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1b73A01 82.48 Glutamate racemaseAquifex pyrophilus 3.40.50.1860 143 14 73 2.61 3.55
1jflA02 80.50 Aspartate racemase [EC:5.1.1.13]228aa long hypothetical aspartate racemasePyrococcus horikoshiiAlanine, aspartate and glutamate metabolism 3.40.50.1860 109 19 75 2.66 3.52
1jyeA01 80.39 Lactose operon repressorProtein bindingEscherichia coli K-12Cytosol 3.40.50.2300 130 7 74 3.24 4.34
2driA01 79.85 Bacterial chemotaxisABC transportersD-ribose-binding periplasmic proteinRibose transport system substrate-binding proteinMembrane 3.40.50.2300 125 10 76 3.20 4.17
2pjuC01 79.57 Positive regulation of gene-specific transcriptionPropionate catabolism operon regulatory proteinNegative regulation of gene-specific transcriptionEscherichia coli K-12Specific transcriptional repressor activity 3.40.50.2300 100 8 76 2.97 3.88
1y7pB02 79.07 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.40.50.10550 137 14 73 3.17 4.30
3brqB01 78.83 Negative regulation of gene-specific transcriptionEscherichia coli K-12Specific transcriptional repressor activityHTH-type transcriptional regulator ascGSequence-specific DNA binding transcription factor activity 3.40.50.2300 127 13 76 3.40 4.45
2rgyA01 78.71 LacI family transcriptional regulatorBurkholderia phymatum STM815Transcriptional regulator, LacI family 3.40.50.2300 122 10 81 3.34 4.12
1srrC00 78.67 Sporulation initiation phosphotransferase FTwo-component system, response regulator, stage 0 sporulation protein FBacillus subtilisTwo-component system 3.40.50.2300 121 12 73 3.35 4.55
3ctpA01 78.62 Alkaliphilus metalliredigens QYMFPeriplasmic binding protein/LacI transcriptional regulator 3.40.50.2300 128 13 72 3.51 4.83
2fepA01 78.62 Bacillus subtilisCatabolite control protein ALacI family transcriptional regulator 3.40.50.2300 133 10 72 3.44 4.77
2qr3A00 78.34 Bacteroides fragilisTwo-component system response regulator 3.40.50.2300 119 9 73 3.42 4.62
2hqbA01 78.29 Transcriptional activator of comK geneTranscriptional activator of comK geneBacillus halodurans 3.40.50.2300 130 10 73 3.09 4.23
3d8uB01 78.25 Putative transcriptional regulatorVibrio parahaemolyticusLacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor 3.40.50.2300 119 8 78 3.88 4.96
3cnbA00 78.09 DNA-binding response regulator, merR familyColwellia psychrerythraea 34H 3.40.50.2300 124 12 72 3.55 4.89
3clkB01 78.01 Lactobacillus plantarumTranscription regulator 3.40.50.2300 119 5 73 3.33 4.50
1zgzA00 77.96 Two-component systemTorCAD operon transcriptional regulatory protein torRTwo-component system, OmpR family, torCAD operon response regulator TorRProtein bindingEscherichia coli K-12 3.40.50.2300 118 10 73 3.57 4.83
1mb3A00 77.80 Caulobacter vibrioidesTwo-component systemTwo-component system, cell cycle response regulator DivKPolar differentiation response regulatorCell cycle - Caulobacter 3.40.50.2300 115 9 74 3.46 4.63
1nytA01 77.71 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysShikimate 5-dehydrogenase [EC:1.1.1.25]Shikimate dehydrogenaseProtein binding 3.40.192.10 115 7 77 3.62 4.68
2q5cA01 77.70 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.2300 97 17 74 3.15 4.21
2b4aA00 77.47 BH3024 proteinBacillus halodurans 3.40.50.2300 116 3 73 3.51 4.75
2fvyA01 77.37 Bacterial chemotaxisABC transportersMethyl-galactoside transport system substrate-binding proteinD-galactose-binding periplasmic proteinEscherichia coli K-12 3.40.50.2300 147 7 65 3.14 4.76
1dbqA01 76.95 LacI family transcriptional regulator, purine nucleotide synthesis repressorHTH-type transcriptional repressor purREscherichia coli K-12 3.40.50.2300 134 11 74 3.62 4.85
2qvgA00 76.78 Two component response regulator[EC:2.7.3.-]Legionella pneumophila subsp. pneumophila str. Philadelphia 1 3.40.50.2300 126 10 70 3.38 4.79
1vrvA00 76.02 Phosphotransferase system (PTS)Fructose and mannose metabolismPTS system, mannitol-specific IIC componentPTS system, mannitol-specific IIA component [EC:2.7.1.69]PTS system, mannitol-specific IIB component [EC:2.7.1.69] 3.40.50.10370 96 10 73 3.37 4.61
3brsA01 75.70 Ribose transport system substrate-binding proteinBacterial chemotaxisPeriplasmic binding protein/LacI transcriptional regulatorClostridium phytofermentans ISDgABC transporters 3.40.50.2300 136 10 69 3.35 4.80
1z0sA01 75.63 Archaeoglobus fulgidusProbable inorganic polyphosphate/ATP-NAD kinaseNAD+ kinase [EC:2.7.1.23]Nicotinate and nicotinamide metabolismMetabolic pathways 3.40.50.10330 123 9 67 3.34 4.95
1a04A01 75.35 Two-component systemTwo-component system, NarL family, nitrate/nitrite response regulator NarLProtein bindingEscherichia coli K-12Nitrate/nitrite response regulator protein narL 3.40.50.2300 124 10 73 3.39 4.62
1gudA01 75.32 ABC transportersMembraneD-allose transport system substrate-binding proteinD-allose-binding periplasmic proteinEscherichia coli K-12 3.40.50.2300 139 5 68 3.14 4.59
1lu9A01 74.28 Methylobacterium extorquens AM1Bifunctional protein mdtA 3.40.50.10280 136 5 69 3.47 4.97
2q5cA02 73.36 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.10660 89 2 62 2.79 4.49
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Displaying entries 1 to 31 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jflA01
MKTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIM
PCNTAHAFVEDIRKAIKIPIISMIMDVIAEVAVKVALEK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jflA01
MKTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIM
PCNTAHAFVEDIRKAIKIPIISMIMDVIAEVAVKVALEK
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:56

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"