CATH Domain: 1jf8A00 XML data for domain: 1jf8A00

Molscript image for 1jf8A00
1jf8A00
PDB coordinates for domain 1jf8A00

PDB 1jf8, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.270 Gene3D
3.40.50.270.1
3.40.50.270.1.1
3.40.50.270.1.1.1
3.40.50.270.1.1.1.1
3.40.50.270.1.1.1.1.1

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Segment boundaries for domain 1jf8A00

Chopping figure for domain 1jf8A00
DomainStart PDB ResidueStop PDB Residue
1jf8A00 2 131

Structural Neighbourhood (17 entries)

There are 17 matching structural neighberhood comparisons for CATH ID 3.40.50.270.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 17 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2cwdC00 88.01 Thermus thermophilus HB8Low molecular weight phosphotyrosine protein phosphataseProtein-tyrosine phosphatase [EC:3.1.3.48] 3.40.50.270 148 20 85 1.66 1.93
1xwwA00 86.78 Acid phosphatase activityIdentical protein bindingSoluble fractionHomo sapiensLow molecular weight phosphotyrosine protein phosphatase 3.40.50.270 157 19 82 1.85 2.25
2gi4A00 80.48 Campylobacter jejuniProtein-tyrosine phosphatase [EC:3.1.3.48]Putative phosphotyrosine protein phosphatase 3.40.50.270 156 20 82 3.01 3.64
3cwcB01 78.13 Glycerate kinase [EC:2.7.1.31]Glycerolipid metabolismSalmonella enterica subsp. enterica serovar TyphimuriumPutative glycerate kinase 2Glycine, serine and threonine metabolism 3.40.50.10350 137 8 73 2.75 3.73
1vrvA00 77.59 Phosphotransferase system (PTS)Fructose and mannose metabolismPTS system, mannitol-specific IIC componentPTS system, mannitol-specific IIA component [EC:2.7.1.69]PTS system, mannitol-specific IIB component [EC:2.7.1.69] 3.40.50.10370 96 12 64 2.77 4.29
1iibA00 77.36 Phosphotransferase system (PTS)N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB componentPTS system, cellobiose-specific IIB component [EC:2.7.1.69]Escherichia coli K-12 3.40.50.270 103 10 70 3.33 4.71
1srrC00 77.02 Sporulation initiation phosphotransferase FTwo-component system, response regulator, stage 0 sporulation protein FBacillus subtilisTwo-component system 3.40.50.2300 121 10 66 3.05 4.56
2dc1A01 76.55 Aspartate dehydrogenase [EC:1.4.1.21]Archaeoglobus fulgidusProbable L-aspartate dehydrogenaseNicotinate and nicotinamide metabolism 3.40.50.720 135 9 74 3.71 4.96
3cnbA00 76.25 DNA-binding response regulator, merR familyColwellia psychrerythraea 34H 3.40.50.2300 124 9 66 3.07 4.64
1kgdA01 75.82 Actin cytoskeletonGuanylate kinase activityPeripheral plasma membrane protein CASKCell adhesionHomo sapiens 3.40.50.300 115 6 66 3.21 4.80
1ys7A01 75.66 Transcriptional regulatory protein prrAMycobacterium tuberculosis 3.40.50.2300 122 6 65 2.93 4.48
2qzjA00 74.83 Two-component response regulatorClostridium difficile 630 3.40.50.2300 119 9 63 3.14 4.98
1a2oA01 74.78 Bacterial chemotaxisTwo-component systemChemotaxis response regulator protein-glutamate methylesteraseTwo-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]Salmonella enterica subsp. enterica serovar Typhimurium 3.40.50.2300 133 6 70 3.39 4.80
1m1nA03 74.59 Azotobacter vinelandiiNitrogenase molybdenum-iron protein alpha chain 3.40.50.1980 115 6 71 3.21 4.49
3cu5B00 74.14 Clostridium phytofermentans ISDgTwo component transcriptional regulator, AraC family 3.40.50.2300 129 5 66 3.25 4.86
3crnA00 73.70 Response regulator receiver domain protein (CheY-like)Methanospirillum hungatei JF-1 3.40.50.2300 118 7 57 2.77 4.80
1y63A00 73.41 Leishmania majorPutative uncharacterized protein 3.40.50.300 168 8 53 2.66 4.97
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Displaying entries 1 to 17 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jf8A00
DKKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTL
CSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLAIEKFKLR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jf8A00
MDKKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVT
LCSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLAIEKFKLR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:13

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:35

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"