CATH Domain: 1jayA00 XML data for domain: 1jayA00

Molscript image for 1jayA00
1jayA00
PDB coordinates for domain 1jayA00

PDB 1jay, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.23
3.40.50.720.23.1
3.40.50.720.23.1.1
3.40.50.720.23.1.1.1
3.40.50.720.23.1.1.1.1

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Segment boundaries for domain 1jayA00

Chopping figure for domain 1jayA00
DomainStart PDB ResidueStop PDB Residue
1jayA00 1 212

Structural Neighbourhood (24 entries)

There are 24 matching structural neighberhood comparisons for CATH ID 3.40.50.720.23.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 24 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1dljA01 80.50 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismPentose and glucuronate interconversionsAscorbate and aldarate metabolismMetabolic pathways 3.40.50.720 204 9 81 2.72 3.33
1bg6A01 80.39 Arthrobacter sp. 1COpine dehydrogenase 3.40.50.720 192 11 79 2.84 3.58
1np3B01 79.76 Pantothenate and CoA biosynthesisMetabolic pathwaysValine, leucine and isoleucine biosynthesisKetol-acid reductoisomerasePseudomonas aeruginosa 3.40.50.720 182 14 73 2.61 3.57
2rcyA01 79.29 Arginine and proline metabolismMetabolic pathwaysPlasmodium falciparum 3D7Pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2] 3.40.50.720 148 17 65 2.27 3.49
2o3jB01 78.94 Caenorhabditis elegansAmino sugar and nucleotide sugar metabolismIdentical protein bindingEmbryo development ending in birth or egg hatchingMetabolic pathways 3.40.50.720 205 11 76 3.05 3.99
3ckyA01 78.88 Eubacterium barkeri2-hydroxymethyl glutarate dehydrogenase 3.40.50.720 163 15 71 2.65 3.70
2amfA01 78.75 Arginine and proline metabolismMetabolic pathwaysPutative pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2]Streptococcus pyogenes serotype M1 3.40.50.720 148 12 68 2.52 3.68
1i36A01 78.65 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.720 159 19 74 2.79 3.74
2pv7A01 78.16 T-proteinNovobiocin biosynthesisHaemophilus influenzaePhenylalanine, tyrosine and tryptophan biosynthesisPrephenate dehydrogenase [EC:1.3.1.12] 3.40.50.720 154 19 67 2.76 4.06
1ks9A01 77.84 Pantothenate and CoA biosynthesisMetabolic pathways2-dehydropantoate 2-reductase [EC:1.1.1.169]2-dehydropantoate 2-reductase activityPantothenate biosynthetic process from valine 3.40.50.720 167 13 73 3.55 4.82
3d1lB01 77.75 Bacteroides fragilis NCTC 9343Putative uncharacterized protein 3.40.50.720 151 13 67 2.65 3.90
2ew2B01 77.73 2-dehydropantoate 2-reductase [EC:1.1.1.169]Pantothenate and CoA biosynthesis2-dehydropantoate 2-reductaseMetabolic pathwaysEnterococcus faecalis 3.40.50.720 174 13 75 3.73 4.91
1qmgB01 77.47 NADPH bindingProtein homodimerization activityMagnesium ion bindingSpinacia oleraceaKetol-acid reductoisomerase, chloroplastic 3.40.50.720 216 8 71 3.29 4.58
2cvzA01 77.16 Valine, leucine and isoleucine degradationMetabolic pathwaysThermus thermophilus HB83-hydroxyisobutyrate dehydrogenase3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] 3.40.50.720 153 20 70 2.83 4.03
3c24A01 77.01 Jannaschia sp. CCS1Putative uncharacterized protein 3.40.50.720 168 12 68 3.22 4.71
1hyeA01 76.65 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.40.50.720 147 16 56 2.61 4.65
1ur5C01 76.64 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 16 56 2.40 4.28
1o6zA02 76.61 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiMetabolic pathways 3.40.50.720 142 14 55 2.54 4.60
1t2dA01 76.46 L-lactate dehydrogenaseCysteine and methionine metabolismGlycolysis / GluconeogenesisPyruvate metabolismPlasmodium falciparum CDC/Honduras 3.40.50.720 148 11 55 2.49 4.51
2i76A01 76.32 Thermotoga maritimaPutative uncharacterized protein 3.40.50.720 142 18 66 2.58 3.85
1vpdA01 76.22 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysSalmonella enterica subsp. enterica serovar Typhimurium2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]Tartronate semialdehyde reductase (TSAR) 3.40.50.720 154 16 69 2.80 4.01
3d0oA01 75.33 Pyruvate metabolismPropanoate metabolismMetabolic pathwaysCysteine and methionine metabolismGlycolysis / Gluconeogenesis 3.40.50.720 143 11 55 2.68 4.86
3hhpA01 75.24 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.40.50.720 138 20 54 2.67 4.88
2qytA01 74.47 Porphyromonas gingivalis2-dehydropantoate 2-reductase 3.40.50.720 179 13 72 3.47 4.81
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Displaying entries 1 to 24 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1jayA00
MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDT
ARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDES
KKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIMRFNGMGELGIKFL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1jayA00
MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDT
ARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDES
KKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIMRFNGMGELGIKFL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:16

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:40

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"