CATH Domain: 1j94D00 XML data for domain: 1j94D00

Molscript image for 1j94D00
1j94D00
PDB coordinates for domain 1j94D00

PDB 1j94, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.550 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A Gene3D
3.90.550.10.2
3.90.550.10.2.1
3.90.550.10.2.1.2
3.90.550.10.2.1.2.10
3.90.550.10.2.1.2.10.1

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Segment boundaries for domain 1j94D00

Chopping figure for domain 1j94D00
DomainStart PDB ResidueStop PDB Residue
1j94D00 534 804

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1j94D00
TACPEESPLLVGPLIEFNIPVDLKLVEQQNPKVKLGGRYTPDCISPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQLDY
GIYVINQAGESFNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPNDHNTYRCFSQPRHISVADKFGFSLPYVQYFGGVSAL
SKQQFLSINGFPNNYWGWGGEDDDIYNRLAFRGSVSRPNAVIGKCRIRHSRDKKNEPNPQRFDRIAHTKETLSDGLNSLT
YVLEVQRYPLYTKITVDIGTPS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1j94D00
SLTACPEESPLLVGPXLIEFNIPVDLKLVEQQNPKVKLGGRYTPXDCISPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQ
QLDYGIYVINQAGESXFNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPXNDHNTYRCFSQPRHISVAXDKFGFSLPYVQY
FGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRLAFRGXSVSRPNAVIGKCRXIRHSRDKKNEPNPQRFDRIAHTKET
XLSDGLNSLTYXVLEVQRYPLYTKITVDIGTPS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:35

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:35

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:59

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"