CATH Domain: 1j58A02 XML data for domain: 1j58A02

Molscript image for 1j58A02
1j58A02
PDB coordinates for domain 1j58A02

PDB 1j58, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.10 Jelly Rolls Gene3D
2.60.120.10.9
2.60.120.10.9.1
2.60.120.10.9.1.1
2.60.120.10.9.1.1.1
2.60.120.10.9.1.1.1.1

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Segment boundaries for domain 1j58A02

Chopping figure for domain 1j58A02
DomainStart PDB ResidueStop PDB Residue
1j58A01 8 55
1j58A01 230 379
1j58A02 56 229

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 2.60.120.10.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1j58A01 82.88 Bacillus subtilisOxalate decarboxylase [EC:4.1.1.2]Oxalate decarboxylase oxdCMetabolic pathwaysGlyoxylate and dicarboxylate metabolism 2.60.120.10 192 23 71 1.92 2.67
1dgwA00 82.45 CanavalinCanavalia ensiformis 2.60.120.10 178 13 80 2.65 3.28
1fi2A00 81.33 Hordeum vulgareOxalate oxidase 1 2.60.120.10 201 15 69 2.15 3.11
2d5fA01 80.41 Glycine maxGlycinin A3B4 subunit 2.60.120.10 226 15 72 2.64 3.64
3c3vA01 79.61 Arachis hypogaeaArachin Arah3 isoform 2.60.120.10 227 14 70 2.85 4.04
2pfwA00 77.27 Cupin 2 domain-containing proteinShewanella frigidimarina NCIMB 400Cupin 2, conserved barrel domain protein 2.60.120.10 109 15 55 2.65 4.80
1o4tA00 77.12 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 115 19 55 2.39 4.28
1vj2A00 76.95 Thermotoga maritimaPutative uncharacterized protein 2.60.120.10 114 14 56 2.06 3.65
2qjvA01 75.30 Inositol phosphate metabolismMetabolic pathwaysSalmonella enterica subsp. enterica serovar Typhimurium5-deoxy-glucuronate isomerase [EC:5.3.1.-]Putative inner membrane protein 2.60.120.10 143 9 65 3.04 4.67
2q30A01 73.89 Desulfovibrio desulfuricans subsp. desulfuricans str. G20Putative uncharacterized protein 2.60.120.10 85 16 47 2.19 4.59
2pytA00 73.78 Ethanolamine utilization protein EutQSalmonella enterica subsp. enterica serovar TyphimuriumEthanolamine utilization protein eutQ 2.60.120.10 118 10 51 2.22 4.29
2oyzA00 72.64 Hypothetical proteinVibrio parahaemolyticusUPF0345 protein VPA0057 2.60.120.10 87 10 47 2.24 4.70
1qwrA02 72.62 Amino sugar and nucleotide sugar metabolismBacillus subtilisMannose-6-phosphate isomerase [EC:5.3.1.8]Putative mannose-6-phosphate isomerase yvyIFructose and mannose metabolism 2.60.120.10 86 11 48 2.21 4.58
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Displaying entries 1 to 13 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1j58A02
HNRLEKGGYAREVTVRELPISENLASVNRLKPGAIRELHWHKEAEWAYIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSG
LPHSIQALEEGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEG
PNGEVPYPFTYR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1j58A02
HNRLEKGGYAREVTVRELPISENLASVNXRLKPGAIRELHWHKEAEWAYXIYGSARVTIVDEKGRSFIDDVGEGDLWYFP
SGLPHSIQALEEGAEFLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIV
EGPNGEVPYPFTYR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:54

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"