CATH Domain: 1j34A00 XML data for domain: 1j34A00

Molscript image for 1j34A00
1j34A00
PDB coordinates for domain 1j34A00

PDB 1j34, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.7
3.10.100.10.7.1
3.10.100.10.7.1.1
3.10.100.10.7.1.1.1
3.10.100.10.7.1.1.1.1

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Segment boundaries for domain 1j34A00

Chopping figure for domain 1j34A00
DomainStart PDB ResidueStop PDB Residue
1j34A00 1 129

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.10.100.10.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1j34B00 90.98 Trimeresurus flavoviridisCoagulation factor IX/factor X-binding protein subunit B 3.10.100.10 123 45 93 1.90 2.03
1eggA00 84.67 Macrophage mannose receptor 1Mannose bindingIntegral to plasma membraneReceptor activityReceptor-mediated endocytosis 3.10.100.10 132 21 88 4.10 4.63
1rjhA00 82.30 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 18 73 3.55 4.82
1cwvA05 76.41 InvasinYersinia pseudotuberculosis 3.10.100.10 100 9 68 3.05 4.47
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1j34A00
DCPSGWSSYEGHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQCS
SEWSDGSSVSYENWIEAESKTCLGLEKETGFRKWVNIYCGQQNPFVCEA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1j34A00
DCPSGWSSYEGHCYKPFKLYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQLVTENIQNTKSYVWIGLRVQGKEKQCS
SEWSDGSSVSYENWIEAESKTCLGLEKETGFRKWVNIYCGQQNPFVCEA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"