CATH Domain: 1j0aA01 XML data for domain: 1j0aA01

Molscript image for 1j0aA01
1j0aA01
PDB coordinates for domain 1j0aA01

PDB 1j0a, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1100 Gene3D
3.40.50.1100.11
3.40.50.1100.11.1
3.40.50.1100.11.1.1
3.40.50.1100.11.1.1.1
3.40.50.1100.11.1.1.1.1

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Segment boundaries for domain 1j0aA01

Chopping figure for domain 1j0aA01
DomainStart PDB ResidueStop PDB Residue
1j0aA01 1 52
1j0aA01 158 325
1j0aA02 53 156

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.1100.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p5jA01 81.99 L-serine ammonia-lyase activityProtein homodimerization activityGlycine, serine and threonine metabolismMetabolic pathwaysPyruvate biosynthetic process 3.40.50.1100 223 18 84 3.31 3.93
1tdjA01 81.19 Glycine, serine and threonine metabolismValine, leucine and isoleucine biosynthesisMetabolic pathwaysThreonine dehydratase biosyntheticL-threonine ammonia-lyase activity 3.40.50.1100 223 13 83 3.82 4.58
1v7cA01 79.49 Threonine synthase [EC:4.2.3.1]Vitamin B6 metabolismGlycine, serine and threonine metabolismThreonine synthaseMetabolic pathways 3.40.50.1100 254 17 77 3.78 4.87
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1j0aA01
MHPKIFALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGGASPIGTLGYVRAVGEIATQSEVKFDSI
VVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGEYGKITGEVAQ
IIRKVGTREGIILDPVYTGKAFYGLVDLARKGELGEKILFIHTGGISGTFHYGDKLLSLL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1j0aA01
MHPKIFALLAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGGASPIGTLGYVRAVGEIATQSEVKFDSI
VVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKVEVRPELYDYSFGEYGKITGEVAQ
IIRKVGTREGIILDPVYTGKAFYGLVDLARKGELGEKILFIHTGGISGTFHYGDKLLSLL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"