CATH Domain: 1izoA00 XML data for domain: 1izoA00

Molscript image for 1izoA00
1izoA00
PDB coordinates for domain 1izoA00

PDB 1izo, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.630 Cytochrome p450
1.10.630.10 Cytochrome p450 Gene3D
1.10.630.10.15
1.10.630.10.15.1
1.10.630.10.15.1.1
1.10.630.10.15.1.1.1
1.10.630.10.15.1.1.1.1

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Segment boundaries for domain 1izoA00

Chopping figure for domain 1izoA00
DomainStart PDB ResidueStop PDB Residue
1izoA00 6 416

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 1.10.630.10.15.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cptA00 80.00 Pseudomonas sp.Cytochrome P450-terp 1.10.630.10 412 14 91 3.64 3.96
2z3tA00 79.76 Cytochrome P450Streptomyces sp. TP-A0274 1.10.630.10 385 15 90 3.99 4.40
3czhA00 78.37 Vitamin D 25-hydroxylaseHomo sapiensCytochrome P450, family 2, subfamily R 1.10.630.10 465 15 86 3.38 3.91
1tqnA00 77.49 Vitamin D 24-hydroxylase activityCell surfaceSteroid bindingSteroid hormone biosynthesisMetabolic pathways 1.10.630.10 468 16 83 3.25 3.88
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1izoA00
PHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQ
GMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADD
FIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIV
AISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDP
RLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPE
SGFVMSGIRRK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1izoA00
MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFG
VNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVK
ERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINV
LRPIVAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYG
TNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARM
PSLPESGFVMSGIRRKS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:15

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:36

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"