CATH Domain: 1iz5A00 XML data for domain: 1iz5A00

Molscript image for 1iz5A00
1iz5A00
PDB coordinates for domain 1iz5A00

PDB 1iz5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.70 Box
3.70.10 Proliferating Cell Nuclear Antigen
3.70.10.10 Gene3D
3.70.10.10.4
3.70.10.10.4.1
3.70.10.10.4.1.1
3.70.10.10.4.1.1.1
3.70.10.10.4.1.1.1.1

[top]
Segment boundaries for domain 1iz5A00

Chopping figure for domain 1iz5A00
DomainStart PDB ResidueStop PDB Residue
1iz5A00 2 246

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.70.10.10.4.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1u7bA00 88.66 Nucleotide excision repairDNA replicationBase excision repairCell cycleMismatch repair 3.70.10.10 251 25 95 2.23 2.33
1plqA00 86.95 DNA replicationProliferating cell nuclear antigenProliferating cell nuclear antigenPCNA complexProtein binding 3.70.10.10 258 27 92 2.54 2.74
1vpkA03 73.75 Thermotoga maritimaPyrimidine metabolismDNA replicationPurine metabolismMetabolic pathways 3.10.150.10 119 21 45 2.25 4.91
3d1gA03 73.46 Pyrimidine metabolismDNA replicationPurine metabolismMetabolic pathwaysHomologous recombination 3.10.150.10 119 17 46 2.30 4.97
3d1gA01 72.25 Pyrimidine metabolismDNA replicationPurine metabolismMetabolic pathwaysHomologous recombination 3.10.150.10 123 13 42 2.01 4.73
[1]
Displaying entries 1 to 5 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1iz5A00
PFEIVFEGAKEFAQLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNLDHLKKILK
RGKAKDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEPELPFTAKVVVLGEVLKAAVKAASLVSDSIKFIARENEFIM
KAEGETQEVEIKLTLEDEGLLDIEVQEETKSAYGVSYLSDMVKGLGKADEVTIKFGNEMPMQMEYYIRDEGRLTFLLAPR
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1iz5A00
MPFEIVFEGAKEFAQLIDTASKLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPSSIFSKYEVVEPETIGVNLDHLKKIL
KRGKAKDTLILKKGEENFLEITIQGTATRTFRVPLIDVEEMEVDLPELPFTAKVVVLGEVLKAAVKAASLVSDSIKFIAR
ENEFIMKAEGETQEVEIKLTLEDEGLLDIEVQEETKSAYGVSYLSDMVKGLGKADEVTIKFGNEMPMQMEYYIRDEGRLT
FLLAPRVEE
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:55

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"