CATH Domain: 1iybA00 XML data for domain: 1iybA00

Molscript image for 1iybA00
1iybA00
PDB coordinates for domain 1iybA00

PDB 1iyb, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.730 Ribonuclease Rh; Chain A
3.90.730.10 Ribonuclease Rh; Chain A Gene3D
3.90.730.10.4
3.90.730.10.4.1
3.90.730.10.4.1.1
3.90.730.10.4.1.1.1
3.90.730.10.4.1.1.1.1

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Segment boundaries for domain 1iybA00

Chopping figure for domain 1iybA00
DomainStart PDB ResidueStop PDB Residue
1iybA00 -3 204

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.90.730.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jy5A00 89.59 Calystegia sepiumRNase-like protein 3.90.730.10 203 32 93 3.55 3.79
1bolA00 85.44 Ribonuclease RhRhizopus niveus 3.90.730.10 222 27 81 2.63 3.23
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1iybA00
YVEFAQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLISRMQQNW
PTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQGAGIHPDGGFYSLNSIKNAIRSAIGYAP
GIECNVDESGNSQLYQIYICVDGSGSNLIECPIFPRGKCGSSIEFPTF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1iybA00
YVEFAQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLISRMQQNW
PTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQGAGIHPDGGFYSLNSIKNAIRSAIGYAP
GIECNVDESGNSQLYQIYICVDGSGSNLIECPIFPRGKCGSSIEFPTF
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:36

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:36

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:59

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"