CATH Domain: 1ixhA02 XML data for domain: 1ixhA02

Molscript image for 1ixhA02
1ixhA02
PDB coordinates for domain 1ixhA02

PDB 1ixh, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.190 D-Maltodextrin-Binding Protein; domain 2
3.40.190.10 Periplasmic binding protein-like II Gene3D
3.40.190.10.7
3.40.190.10.7.1
3.40.190.10.7.1.1
3.40.190.10.7.1.1.1
3.40.190.10.7.1.1.1.1

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Segment boundaries for domain 1ixhA02

Chopping figure for domain 1ixhA02
DomainStart PDB ResidueStop PDB Residue
1ixhA01 1 77
1ixhA01 230 239
1ixhA01 254 321
1ixhA02 78 229
1ixhA02 240 253

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.190.10.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1pc3A02 90.15 Two-component systemABC transportersPhosphate-binding protein pstS 1Phosphate transport system substrate-binding proteinMycobacterium tuberculosis 3.40.190.10 184 34 89 1.37 1.53
1twyD02 84.54 Two-component systemABC transportersVibrio choleraePhosphate transport system substrate-binding proteinABC transporter, periplasmic substrate-binding protein 3.40.190.10 132 23 77 2.88 3.71
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ixhA02
GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEEWK
NNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKDLTNQKGE
DAWPIT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ixhA02
GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEEWK
NNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKDLTNQKGE
DAWPIT
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "1ixh002" to "1ixhA02" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"