CATH Domain: 1ivnA00 XML data for domain: 1ivnA00

Molscript image for 1ivnA00
1ivnA00
PDB coordinates for domain 1ivnA00

PDB 1ivn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1110 Gene3D
3.40.50.1110.5
3.40.50.1110.5.2
3.40.50.1110.5.2.1
3.40.50.1110.5.2.1.1
3.40.50.1110.5.2.1.1.1

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Segment boundaries for domain 1ivnA00

Chopping figure for domain 1ivnA00
DomainStart PDB ResidueStop PDB Residue
1ivnA00 1 180

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.1110.5.2.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1yzfA00 82.24 Lipase/acylhydrolaseEnterococcus faecalis 3.40.50.1110 195 20 84 3.03 3.60
1z8hA00 81.92 Nostoc sp. PCC 7120Alr1529 protein 3.40.50.1110 197 15 84 2.91 3.45
3bzwF00 78.40 Bacteroides thetaiotaomicronPutative lipase 3.40.50.1110 235 13 67 2.95 4.39
2qxyA00 74.11 Thermotoga maritimaResponse regulatorTwo-component system, unclassified family, response regulator 3.40.50.2300 118 11 63 2.92 4.63
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ivnA00
ADTLLILGDSLSAGYRMSASAAWPALLNDKWSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQP
QQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDGIHPNRD
AQPFIADWMAKQLQPLVNH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ivnA00
ADTLLILGDSLSAGYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQ
PQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDGIHPNR
DAQPFIADWMAKQLQPLVNHDSLEHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"