CATH Domain: 1ivhA03 XML data for domain: 1ivhA03

Molscript image for 1ivhA03
1ivhA03
PDB coordinates for domain 1ivhA03

PDB 1ivh, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.140 Butyryl-CoA Dehydrogenase, subunit A; domain 3
1.20.140.10 Butyryl-CoA Dehydrogenase, subunit A, domain 3 Gene3D
1.20.140.10.11
1.20.140.10.11.1
1.20.140.10.11.1.1
1.20.140.10.11.1.1.1
1.20.140.10.11.1.1.1.1

[top]
Segment boundaries for domain 1ivhA03

Chopping figure for domain 1ivhA03
DomainStart PDB ResidueStop PDB Residue
1ivhA01 9 130
1ivhA02 131 250
1ivhA03 251 391

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 1.20.140.10.11.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2cj4A00 78.96 Nicotiana tabacumInvertase inhibitor 1.20.140.40 147 5 77 3.84 4.95
1u8vB03 78.10 Gamma-aminobutyrate metabolism dehydratase/isomeraseClostridium aminobutyricum 1.20.140.10 213 10 63 2.40 3.76
1sj8A02 77.49 Mus musculusTalin-1Focal adhesionCell-substrate junction assemblyCortical actin cytoskeleton organization 1.20.1440.10 122 8 83 4.14 4.95
1p49A02 69.87 LysosomeSteryl-sulfataseMicrosomeSteryl-sulfatase [EC:3.1.6.2]Plasma membrane 1.10.287.550 59 3 37 1.87 4.97
[1]
Displaying entries 1 to 4 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1ivhA03
LDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAG
VILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNA
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1ivhA03
LDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAG
VILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNA
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:19

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"