CATH Domain: 1iv8A05 XML data for domain: 1iv8A05

Molscript image for 1iv8A05
1iv8A05
PDB coordinates for domain 1iv8A05

PDB 1iv8, Chain A, Domain 5

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1180 Golgi alpha-mannosidase II Gene3D
2.60.40.1180.27
2.60.40.1180.27.1
2.60.40.1180.27.1.1
2.60.40.1180.27.1.1.1
2.60.40.1180.27.1.1.1.1

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Segment boundaries for domain 1iv8A05

Chopping figure for domain 1iv8A05
DomainStart PDB ResidueStop PDB Residue
1iv8A01 1 87
1iv8A01 207 285
1iv8A01 419 459
1iv8A01 557 654
1iv8A02 88 205
1iv8A03 305 389
1iv8A04 460 556
1iv8A05 655 720

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.60.40.1180.27.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gjwA02 84.27 Thermotoga maritimaMaltodextrin glycosyltransferase 2.60.40.1180 68 9 83 2.28 2.72
1lwjA03 81.47 4-alpha-glucanotransferase [EC:2.4.1.25]Thermotoga maritimaStarch and sucrose metabolism4-alpha-glucanotransferaseMetabolic pathways 2.60.40.1180 50 10 66 1.75 2.62
1kwgA03 81.39 Beta-galactosidaseThermus thermophilus 2.60.40.1180 50 12 74 2.42 3.26
1ea9C04 80.17 Bacillus sp.Cyclomaltodextrinase 2.60.40.1180 81 10 81 2.46 3.02
1eh9A02 75.55 Sulfolobus solfataricusMalto-oligosyltrehalose trehalohydrolase 2.60.40.1180 62 3 83 3.84 4.61
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1iv8A05
YKGLDLEEGLCGFIRFNKILVIIKTKGSVNYKLKLEEGAIYTDVLTGEEIKKEVQINELPRILVRM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1iv8A05
YKGLDLEEGLCGFIRFNKILVIIKTKGSVNYKLKLEEGAIYTDVLTGEEIKKEVQINELPRILVRM
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:44

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"