CATH Domain: 1itxA01 XML data for domain: 1itxA01

Molscript image for 1itxA01
1itxA01
PDB coordinates for domain 1itxA01

PDB 1itx, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.80 Glycosidases Gene3D
3.20.20.80.1
3.20.20.80.1.1
3.20.20.80.1.1.1
3.20.20.80.1.1.1.1
3.20.20.80.1.1.1.1.1

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Segment boundaries for domain 1itxA01

Chopping figure for domain 1itxA01
DomainStart PDB ResidueStop PDB Residue
1itxA01 33 336
1itxA01 410 451
1itxA02 337 409

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.20.20.80.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1edqA02 87.81 Chitinase ASerratia marcescens 3.20.20.80 355 29 92 3.68 3.98
1w9pA01 87.76 Amino sugar and nucleotide sugar metabolismChitinaseChitinase [EC:3.2.1.14]Aspergillus fumigatus 3.20.20.80 332 33 85 1.89 2.21
1vf8A01 87.17 Mus musculusBeta-N-acetylhexosaminidase activityCytoplasmic membrane-bounded vesicleChitinase-3-like protein 3Sugar binding 3.20.20.80 302 29 80 1.30 1.61
1jndA01 84.82 Amino sugar and nucleotide sugar metabolismChitinase [EC:3.2.1.14]Imaginal disc developmentChitinase-like protein Idgf2Imaginal disc growth factor receptor binding 3.20.20.80 306 22 81 3.01 3.68
1goiA01 83.54 ChitinaseSerratia marcescens 3.20.20.80 356 28 80 3.09 3.83
3fndA01 82.10 ChitinaseBacteroides thetaiotaomicron 3.20.20.80 261 18 71 2.43 3.38
1ta3A00 75.74 Triticum aestivumXylanase inhibitor protein 1 3.20.20.80 274 15 72 3.54 4.89
1narA00 75.11 NarboninVicia narbonensis 3.20.20.80 289 12 73 3.46 4.70
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1itxA01
LQPATAEAADSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPVTWTCQNEKSQTINVP
NGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLKTIISVGGWTWSNRFSDVAATAATREVFANSAVDFLR
KYNFDGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASATYAANTELAKIAAIVD
WINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVPDDAESVGYKTAYIKSK
GLGGAMFWELSGDRNKTLQNKLKADL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1itxA01
LQPATAEAADSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPVTWTCQNEKSQTINVP
NGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLKTIISVGGWTWSNRFSDVAATAATREVFANSAVDFLR
KYNFDGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASATYAANTELAKIAAIVD
WINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVPDDAESVGYKTAYIKSK
GLGGAMFWELSGDRNKTLQNKLKADL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:52

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"