CATH Domain: 1itkA04 XML data for domain: 1itkA04

Molscript image for 1itkA04
1itkA04
PDB coordinates for domain 1itkA04

PDB 1itk, Chain A, Domain 4

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.420 Peroxidase; domain 2
1.10.420.10 Peroxidase, domain 2 Gene3D
1.10.420.10.4
1.10.420.10.4.2
1.10.420.10.4.2.1
1.10.420.10.4.2.1.1
1.10.420.10.4.2.1.1.1

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Segment boundaries for domain 1itkA04

Chopping figure for domain 1itkA04
DomainStart PDB ResidueStop PDB Residue
1itkA01 53 182
1itkA01 403 414
1itkA02 233 266
1itkA02 303 402
1itkA03 436 580
1itkA03 710 731
1itkA04 581 709

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.420.10.4.2.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ccaA02 82.96 Methane metabolismPhenylalanine metabolismTryptophan metabolismMetabolic pathwaysCatalase/peroxidase [EC:1.11.1.6 1.11.1.7] 1.10.420.10 133 15 80 3.17 3.94
1bgpA02 77.23 Hordeum vulgarePeroxidase BP 1 1.10.420.10 136 8 63 2.99 4.67
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1itkA04
VDGVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDLGVFTDEPETLTNDFFVNLLDMGTEWEP
AADSEHRYKGLDRDTGEVKWEATRIDLIFGSNDRLRAISEVYGSADAEK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1itkA04
VDGVRNYIQDDITRPAEEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDLGVFTDEPETLTNDFFVNLLDMGTEWEP
AADSEHRYKGLDRDTGEVKWEATRIDLIFGSNDRLRAISEVYGSADAEK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 16:52

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"