CATH Domain: 1iomA02 XML data for domain: 1iomA02

Molscript image for 1iomA02
1iomA02
PDB coordinates for domain 1iomA02

PDB 1iom, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.230 Cytochrome p450-Terp; domain 2
1.10.230.10 Cytochrome P450-Terp, domain 2 Gene3D
1.10.230.10.1
1.10.230.10.1.1
1.10.230.10.1.1.1
1.10.230.10.1.1.1.1
1.10.230.10.1.1.1.1.1

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Segment boundaries for domain 1iomA02

Chopping figure for domain 1iomA02
DomainStart PDB ResidueStop PDB Residue
1iomA01 13 220
1iomA01 323 356
1iomA02 221 322

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.230.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vgmA02 91.28 Citrate cycle (TCA cycle)Citrate synthaseSulfolobus tokodaiiCitrate synthase [EC:2.3.3.1]Glyoxylate and dicarboxylate metabolism 1.10.230.10 104 44 98 2.01 2.05
1a59A02 88.50 Citrate synthaseAntarctic bacterium DS2-3R 1.10.230.10 108 31 91 2.42 2.64
1cscA02 85.06 Citrate synthase, mitochondrialGallus gallus 1.10.230.10 112 21 87 2.91 3.33
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1iomA02
GANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGK
VLNPRGIYPNVDFYSGVVYSDL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1iomA02
GANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGK
VLNPRGIYPNVDFYSGVVYSDL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:05

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:05

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:51

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"