Set cath from cathlist by auto on 05 Mar 2006 19:04
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
CATH Domain: 1io2A01
1io2A01
PDB 1io2, Chain A, Domain 1
| CATH Code | Level Description | Links |
|---|---|---|
 3
| Alpha Beta | |
 3.30
| 2-Layer Sandwich | |
 3.30.420
| Nucleotidyltransferase; domain 5 | |
 3.30.420.10
| Gene3D | |
 3.30.420.10.8
| ||
 3.30.420.10.8.1
| ||
 3.30.420.10.8.1.1
| ||
 3.30.420.10.8.1.1.1
| ||
 3.30.420.10.8.1.1.1.1
|
Segment boundaries for domain 1io2A01
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1io2A01 | 2 | 161 |
| 1io2A02 | 162 | 208 |
Structural Neighbourhood (1 entries)
There are 1 matching structural neighberhood comparisons for CATH ID 3.30.420.10.8.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 1 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
2rkiA05 | 73.95 | 3.30.420.10 | 126 | 7 | 61 | 3.02 | 4.93 |
[1]
Displaying entries 1 to 1 (page 1 of 1)
Domain ATOM Sequence
>pdb|1io2A01 KIAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIGSREGTLN EFEVENFAKALNSLKVKPDVIYADAADVDEERFARELGERLNFEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKE
Domain History Events (3)
Flow stage update by auto on 05 Mar 2006 19:04
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
Insertion by auto on 05 Mar 2006 16:51
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
