CATH Domain: 1imhC02 XML data for domain: 1imhC02

Molscript image for 1imhC02
1imhC02
PDB coordinates for domain 1imhC02

PDB 1imh, Chain C, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.10 Immunoglobulins Gene3D
2.60.40.10.206
2.60.40.10.206.1
2.60.40.10.206.1.1
2.60.40.10.206.1.1.1
2.60.40.10.206.1.1.1.1

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Segment boundaries for domain 1imhC02

Chopping figure for domain 1imhC02
DomainStart PDB ResidueStop PDB Residue
1imhC01 193 362
1imhC02 363 468

Structural Neighbourhood (21 entries)

There are 21 matching structural neighberhood comparisons for CATH ID 2.60.40.10.206.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 21 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2uzyB03 84.31 Hepatocyte growth factor receptor activityBasal plasma membranePathways in cancerEpithelial cell signaling in Helicobacter pylori infectionProto-oncogene tyrosine-protein kinase Met [EC:2.7.10.1] 2.60.40.10 87 18 72 1.23 1.69
2uzxB02 82.65 Hepatocyte growth factor receptor activityBasal plasma membraneEpithelial cell signaling in Helicobacter pylori infectionPathways in cancerProto-oncogene tyrosine-protein kinase Met [EC:2.7.10.1] 2.60.40.10 121 18 71 1.47 2.04
2uzyB04 82.48 Basal plasma membraneHepatocyte growth factor receptor activityEpithelial cell signaling in Helicobacter pylori infectionPathways in cancerProto-oncogene tyrosine-protein kinase Met [EC:2.7.10.1] 2.60.40.10 79 13 74 1.65 2.21
1cwvA03 78.80 InvasinYersinia pseudotuberculosis 2.60.40.920 102 8 84 3.63 4.28
1cwvA02 78.05 InvasinYersinia pseudotuberculosis 2.60.40.920 97 7 82 3.30 4.02
1k85A00 77.28 Bacillus circulansChitinase A1 2.60.40.10 88 10 72 3.32 4.57
2gy5A04 77.11 MicrovillusCell surfaceTransmembrane receptor protein tyrosine kinase signaling pathwaySignal transductionProtein binding 2.60.40.10 99 8 82 3.70 4.51
2mcmA00 76.61 MacromomycinStreptomyces macromomyceticus 2.60.40.230 112 11 85 4.16 4.85
1p53A01 76.50 Leukocyte migrationAdhesion to symbiontHeterophilic cell-cell adhesionRegulation of leukocyte mediated cytotoxicityT cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell 2.60.40.10 98 5 86 4.00 4.61
1ej6A05 76.42 Mammalian orthoreovirus 3 DearingOuter capsid protein lambda-2 2.60.40.10 95 5 74 3.09 4.15
1ulvA03 76.30 GlucodextranaseArthrobacter globiformis 2.60.40.1560 86 16 76 3.32 4.34
1l0qA02 76.22 Methanosarcina mazeiORF492 2.60.40.670 90 5 73 3.07 4.17
3hn3A02 75.58 Beta-glucuronidaseGlycosaminoglycan degradationGlycosaminoglycan catabolic processMetabolic pathwaysStarch and sucrose metabolism 2.60.40.320 103 6 82 3.72 4.53
2nziA03 75.56 Structural constituent of muscleCalcium ion bindingSarcomere organizationTelethonin bindingActin filament binding 2.60.40.10 94 14 78 3.86 4.93
3k6iA00 75.44 Gallus gallusCadherin-13 2.60.40.60 99 6 80 3.87 4.83
1fnhA03 75.06 FibronectinPeptide cross-linkingER-Golgi intermediate compartmentFibrinogen complexSubstrate adhesion-dependent cell spreading 2.60.40.10 89 10 77 3.59 4.64
1fnhA01 73.65 FibronectinER-Golgi intermediate compartmentPeptide cross-linkingFibrinogen complexSubstrate adhesion-dependent cell spreading 2.60.40.10 90 8 82 3.76 4.58
1nctA00 73.52 Structural constituent of muscleCalcium ion bindingSarcomere organizationTelethonin bindingActin filament binding 2.60.40.10 98 9 83 4.00 4.82
2q0zX03 73.50 ATP-dependent helicase activityPre-mRNA-splicing helicase BRR2 [EC:3.6.1.-]Protein bindingU5 small nuclear ribonucleoprotein 200 kDa helicaseU5 snRNP 2.60.40.150 113 15 81 3.93 4.83
3cmgA02 72.61 Putative beta-galactosidaseBacteroides fragilis NCTC 9343 2.60.40.320 118 10 81 4.03 4.95
1cidA02 71.96 Rattus norvegicusT-cell surface glycoprotein CD4Hematopoietic cell lineageT cell receptor signaling pathwayAntigen processing and presentation 2.60.40.10 71 2 66 3.26 4.87
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Displaying entries 1 to 21 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1imhC02
TQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITL
PVSVGIYVVTNAGRSHDVQPFTYTPD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1imhC02
TQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKSEAEIDMELFHQNHLIVKVPPYHDQHITL
PVSVGIYVVTNAGRSHDVQPFTYTPD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:40

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:40

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:51

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"