CATH Domain: 1ijqA01 XML data for domain: 1ijqA01

Molscript image for 1ijqA01
1ijqA01
PDB coordinates for domain 1ijqA01

PDB 1ijq, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.30 TolB, C-terminal domain Gene3D
2.120.10.30.5
2.120.10.30.5.1
2.120.10.30.5.1.1
2.120.10.30.5.1.1.1
2.120.10.30.5.1.1.1.1

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Segment boundaries for domain 1ijqA01

Chopping figure for domain 1ijqA01
DomainStart PDB ResidueStop PDB Residue
1ijqA01 377 638
1ijqA02 639 692

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 2.120.10.30.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1npeA00 89.01 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 27 95 1.65 1.74
1rwiA00 83.94 Serine/threonine protein kinase, bacterial [EC:2.7.11.1]Serine/threonine-protein kinase pknDMycobacterium tuberculosis 2.120.10.30 256 16 87 4.26 4.87
1l0qA01 78.05 Methanosarcina mazeiORF492 2.130.10.10 295 16 81 4.08 4.99
2ojhA00 78.04 Agrobacterium tumefaciens str. C58Uncharacterized protein Atu1656 2.120.10.30 264 8 87 3.44 3.93
2p4oA01 77.63 Nostoc sp. PCC 7120All0351 protein 2.120.10.30 285 11 76 2.79 3.66
1k32A01 77.03 Tricorn proteaseTricorn protease [EC:3.4.21.-]Thermoplasma acidophilum 2.120.10.60 272 10 83 3.74 4.50
1v04A00 76.34 2.120.10.30 332 9 66 2.51 3.77
1nr0A01 76.17 Caenorhabditis elegansOvipositionLocomotionPositive regulation of locomotionNematode larval development 2.130.10.10 298 8 78 3.86 4.89
1ri6A00 75.56 Pentose phosphate pathwayMetabolic pathways6-phosphogluconolactonase [EC:3.1.1.31]6-phosphogluconolactonase activity6-phosphogluconolactonase 2.130.10.10 333 9 74 3.72 4.97
1zgkA00 74.94 Kelch-like ECH-associated protein 1NucleusCentrosomeHomo sapiensUbiquitin mediated proteolysis 2.120.10.80 273 7 85 3.22 3.77
1cruA00 70.99 Quinoprotein glucose dehydrogenase BAcinetobacter calcoaceticus 2.120.10.30 448 9 49 2.38 4.82
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ijqA01
IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLYDTVISRDIQAPDGLAVDWIH
SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG
ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAEN
LLSPEDMVLFHNLT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ijqA01
IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD
GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT
ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS
DVNLLAENLLSPEDMVLFHNLT
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:22

Cut based on decision in database "DomChop" on "cathdb"