Set cath from cathlist by auto on 05 Mar 2006 18:05
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
CATH Domain: 1iipA02
1iipA02
PDB 1iip, Chain A, Domain 2
| CATH Code | Level Description | Links |
|---|---|---|
 1
| Mainly Alpha | |
 1.10
| Orthogonal Bundle | |
 1.10.150
| DNA polymerase; domain 1 | |
 1.10.150.160
| Gene3D | |
 1.10.150.160.1
| ||
 1.10.150.160.1.1
| ||
 1.10.150.160.1.1.1
| ||
 1.10.150.160.1.1.1.1
| ||
 1.10.150.160.1.1.1.1.1
|
Segment boundaries for domain 1iipA02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1iipA01 | 2 | 185 |
| 1iipA02 | 214 | 298 |
Structural Neighbourhood (4 entries)
There are 4 matching structural neighberhood comparisons for CATH ID 1.10.150.160.1.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 4 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1jm0A00 | 77.48 | 1.20.5.420 | 48 | 2 | 48 | 1.72 | 3.57 | |
|
1g6uA00 | 76.99 | 1.10.287.540 | 47 | 6 | 55 | 2.39 | 4.32 | |
|
2ifoA00 | 75.43 | 1.20.5.230 | 46 | 13 | 54 | 2.00 | 3.70 | |
|
1lwuB03 | 73.09 | 1.20.5.50 | 60 | 3 | 44 | 1.46 | 3.27 |
[1]
Displaying entries 1 to 4 (page 1 of 1)
Domain ATOM Sequence
>pdb|1iipA02 KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAV DSCLE
Domain History Events (3)
Flow stage update by auto on 05 Mar 2006 18:05
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
Insertion by auto on 05 Mar 2006 16:51
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
