CATH Domain: 1if1A00 XML data for domain: 1if1A00

Molscript image for 1if1A00
1if1A00
PDB coordinates for domain 1if1A00

PDB 1if1, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.10 "winged helix" repressor DNA binding domain Gene3D
1.10.10.10.143
1.10.10.10.143.1
1.10.10.10.143.1.2
1.10.10.10.143.1.2.1
1.10.10.10.143.1.2.1.2

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Segment boundaries for domain 1if1A00

Chopping figure for domain 1if1A00
DomainStart PDB ResidueStop PDB Residue
1if1A00 7 111

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.10.10.143.1.2.1.2 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1pp8O00 78.49 39 kDa initiator binding proteinTrichomonas vaginalis 1.10.10.10 97 10 66 2.92 4.42
1gvjA00 78.32 Negative regulation of cell cycleNucleusPositive regulation of cellular component movementRNA polymerase II transcription factor activityProtein binding 1.10.10.10 141 11 56 2.17 3.87
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1if1A00
RMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKAGEKEPDPKTWKANFRCAMN
SLPDIEEVKDQSRNKGSSAVRVYRM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1if1A00
MPITWMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKAGEKEPDPKTWKAN
FRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:02

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"