CATH Domain: 1iejA01 XML data for domain: 1iejA01

Molscript image for 1iejA01
1iejA01
PDB coordinates for domain 1iejA01

PDB 1iej, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.190 D-Maltodextrin-Binding Protein; domain 2
3.40.190.10 Periplasmic binding protein-like II Gene3D
3.40.190.10.16
3.40.190.10.16.1
3.40.190.10.16.1.1
3.40.190.10.16.1.1.1
3.40.190.10.16.1.1.1.1

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Segment boundaries for domain 1iejA01

Chopping figure for domain 1iejA01
DomainStart PDB ResidueStop PDB Residue
1iejA01 5 81
1iejA01 251 316
1iejA02 82 250
1iejA02 317 327

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 3.40.190.10.16.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1h44A01 93.38 Serine-type endopeptidase activityLactotransferrinHomo sapiensHeparin bindingHumoral immune response 3.40.190.10 141 50 97 1.66 1.71
1cb6A01 89.29 Serine-type endopeptidase activityLactotransferrinHomo sapiensHeparin bindingStored secretory granule 3.40.190.10 180 48 77 1.65 2.14
2d3iA03 88.06 Gallus gallusOvotransferrin 3.40.190.10 179 32 73 1.53 2.09
1p99A01 81.07 ABC transportersLactococcal lipoproteinD-methionine transport system substrate-binding proteinStaphylococcus aureus subsp. aureus Mu50 3.40.190.10 144 11 86 3.49 4.02
1xs5A01 80.07 ABC transportersTreponema pallidumMembrane lipoprotein TpN32D-methionine transport system substrate-binding protein 3.40.190.10 134 8 82 3.63 4.40
1us5A01 78.65 Glutamate receptorThermus thermophilus 3.40.190.10 157 10 78 3.86 4.89
1i6aA01 77.43 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activatorEscherichia coli K-12Hydrogen peroxide-inducible genes activator 3.40.190.10 108 7 69 3.16 4.56
3fzvD02 76.41 Probable transcriptional regulatorPseudomonas aeruginosa 3.40.190.10 109 7 67 3.16 4.71
1pc3A01 76.37 Two-component systemABC transportersPhosphate-binding protein pstS 1Phosphate transport system substrate-binding proteinMycobacterium tuberculosis 3.40.190.10 141 10 82 4.10 4.97
3gzgA01 76.01 Molybdate transport system substrate-binding proteinMolybdate-binding periplasmic protein; permeaseABC transportersXanthomonas axonopodis pv. citri 3.40.190.10 120 10 78 3.33 4.25
1atgA01 75.36 Azotobacter vinelandiiBinding protein 3.40.190.10 122 8 76 3.43 4.46
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1iejA01
SVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAITLDGGQVFEAGLAPYKLKPIAAEVAVV
ARDDNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVPSLMDS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1iejA01
SVIRWCTISSPEEKKCNNLRDLTQQERISLTCVQKATYLDCIKAIANNEADAITLDGGQVFEAGLAPYKLKPIAAEVAVV
ARDDNKVEDIWSFLSKAQSDFGVDTKSDFHLFGPPGKKDPVLKDLLFKDSAIMLKRVPSLMDS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:24

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:50

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"