CATH Domain: 1icrA00 XML data for domain: 1icrA00

Molscript image for 1icrA00
1icrA00
PDB coordinates for domain 1icrA00

PDB 1icr, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.109 NADH Oxidase
3.40.109.10 NADH Oxidase Gene3D
3.40.109.10.4
3.40.109.10.4.1
3.40.109.10.4.1.1
3.40.109.10.4.1.1.1
3.40.109.10.4.1.1.1.1

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Segment boundaries for domain 1icrA00

Chopping figure for domain 1icrA00
DomainStart PDB ResidueStop PDB Residue
1icrA00 2 217

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.40.109.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vfrA00 91.04 Vibrio fischeriMajor NAD(P)H-flavin oxidoreductase 3.40.109.10 217 32 98 1.85 1.88
2b67A00 84.52 [EC:1.-.-.-]Nitroreductase family proteinStreptococcus pneumoniae 3.40.109.10 198 21 90 2.22 2.45
2hayC00 83.93 [EC:1.-.-.-]NAD(P)H-dependent quinone reductaseStreptococcus pyogenes serotype M1 3.40.109.10 209 18 89 2.57 2.86
2h0uA00 83.28 NAD(P)H-flavin oxidoreductase[EC:1.-.-.-]Helicobacter pylori 3.40.109.10 187 19 79 2.72 3.42
2freA00 80.92 NAD(P)H-flavin oxidoreductaseAgrobacterium tumefaciens str. C58 3.40.109.10 195 15 78 2.92 3.71
2i7hA00 80.26 Nitroreductase familyBacillus cereus ATCC 14579 3.40.109.10 183 15 75 3.22 4.29
2r01A01 78.76 Chlorobaculum tepidumNitroreductase family protein 3.40.109.10 149 16 65 3.16 4.81
1vkwA01 73.64 Thermotoga maritimaPutative uncharacterized protein 3.40.109.10 118 10 49 2.44 4.93
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1icrA00
DIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHV
VVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDA
VPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1icrA00
MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASH
VVVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD
AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:47

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"