CATH Domain: 1ib8A02 XML data for domain: 1ib8A02

Molscript image for 1ib8A02
1ib8A02
PDB coordinates for domain 1ib8A02

PDB 1ib8, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.30 SH3 type barrels.
2.30.30.180 Gene3D
2.30.30.180.1
2.30.30.180.1.1
2.30.30.180.1.1.1
2.30.30.180.1.1.1.1
2.30.30.180.1.1.1.1.1

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Segment boundaries for domain 1ib8A02

Chopping figure for domain 1ib8A02
DomainStart PDB ResidueStop PDB Residue
1ib8A01 5 87
1ib8A02 94 160

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.30.30.180.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sf9A02 80.12 Bacillus subtilisUncharacterized protein yfhH 2.30.30.340 54 9 80 3.31 4.11
1pm3A00 76.67 Methanothermobacter thermautotrophicus str. Delta HPutative uncharacterized protein 2.30.30.240 69 11 76 3.72 4.84
3be3A00 76.66 Bordetella bronchisepticaPutative uncharacterized protein 2.30.30.320 75 2 70 3.07 4.34
1v76B00 75.04 Pyrococcus horikoshiiRibonuclease P protein component 1Ribonuclease P subunit P29 [EC:3.1.26.5] 2.30.30.210 91 8 61 2.59 4.21
1irxA02 74.43 Aminoacyl-tRNA biosynthesisLysyl-tRNA synthetase, class I [EC:6.1.1.6]Pyrococcus horikoshiiLysyl-tRNA synthetase 2.30.30.300 43 4 62 2.94 4.69
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ib8A02
KTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSKARLAV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ib8A02
KTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSKARLAV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:25

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:50

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"