CATH Domain: 1i7hC00 XML data for domain: 1i7hC00

Molscript image for 1i7hC00
1i7hC00
PDB coordinates for domain 1i7hC00

PDB 1i7h, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.20 Ubiquitin-like (UB roll)
3.10.20.30 Gene3D
3.10.20.30.12
3.10.20.30.12.1
3.10.20.30.12.1.1
3.10.20.30.12.1.1.1
3.10.20.30.12.1.1.1.1

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Segment boundaries for domain 1i7hC00

Chopping figure for domain 1i7hC00
DomainStart PDB ResidueStop PDB Residue
1i7hC00 2 109

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.10.20.30.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1l5pA00 87.46 FerredoxinTrichomonas vaginalis 3.10.20.30 93 18 83 2.12 2.54
1doiA00 82.11 Ferredoxin-1Haloarcula marismortui 3.10.20.30 128 24 77 3.50 4.53
2bs2B01 79.51 Benzoate degradation via CoA ligationButanoate metabolismOxidative phosphorylationTwo-component systemCitrate cycle (TCA cycle) 3.10.20.30 106 9 71 2.90 4.07
1j8cA00 72.66 CytoplasmPlasma membraneHomo sapiensUbiquilinUbiquilin-2 3.10.20.90 103 4 60 2.82 4.69
1m94A00 72.30 Ubiquitin-like protein 5Protein modification processProtein bindingNuclear mRNA splicing, via spliceosomeMating projection 3.10.20.90 73 4 59 2.94 4.96
2bwfA00 72.29 Ubiquitin domain-containing protein DSK2Protein binding, bridgingSpindle pole body duplication in nuclear envelopeSaccharomyces cerevisiaeER-associated protein catabolic process 3.10.20.90 77 14 62 2.99 4.82
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1i7hC00
PKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEP
ESRLSCQARVTDEDLVVEIPRYTINHAR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1i7hC00
MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLE
PESRLSCQARVTDEDLVVEIPRYTINHAREH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:50

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:50

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:12

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"