CATH Domain: 1hzxB00 XML data for domain: 1hzxB00

Molscript image for 1hzxB00
1hzxB00
PDB coordinates for domain 1hzxB00

PDB 1hzx, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.1070 Rhopdopsin 7-helix transmembrane proteins
1.20.1070.10 Rhopdopsin 7-helix transmembrane proteins Gene3D
1.20.1070.10.9
1.20.1070.10.9.1
1.20.1070.10.9.1.1
1.20.1070.10.9.1.1.1
1.20.1070.10.9.1.1.1.1

Segment boundaries for domain 1hzxB00

Chopping figure for domain 1hzxB00
DomainStart PDB ResidueStop PDB Residue
1hzxB00 1 326

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.20.1070.10.9.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2z73B01 85.08 RhodopsinTodarodes pacificus 1.20.1070.10 346 24 82 3.17 3.84
Displaying entries 1 to 1 (page 1 of 1)


Domain ATOM Sequence

>pdb|1hzxB00
MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCGENHAIMGVAFTWVMALACA
APPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLQKAEKEVTRMVIIMVIAFLICW
LPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN    

Domain COMBS Sequence

>pdb|1hzxB00
XMNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNL
AVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF
TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE
SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVT
TLCCGKN    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:20

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:42

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"