Set cath from cathlist by auto on 05 Mar 2006 18:56
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
| CATH Code | Level Description | Links |
|---|---|---|
3
| Alpha Beta | |
3.20
| Alpha-Beta Barrel | |
3.20.20
| TIM Barrel | |
3.20.20.80
| Glycosidases | Gene3D |
3.20.20.80.17
| ||
3.20.20.80.17.1
| ||
3.20.20.80.17.1.1
| ||
3.20.20.80.17.1.1.1
| ||
3.20.20.80.17.1.1.1.1
|
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1hx0A01 | 2 | 403 |
| 1hx0A02 | 404 | 496 |
There are 3 matching structural neighberhood comparisons for CATH ID 3.20.20.80.17.1.1.1.1 (SIMAX score < 5)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
![]() |
1ua7A01 | 83.71 | 3.20.20.80 | 344 | 20 | 82 | 3.00 | 3.63 | |
![]() |
1mxgA01 | 80.45 | 3.20.20.80 | 337 | 16 | 72 | 3.02 | 4.17 | |
![]() |
1eh9A01 | 76.27 | 3.20.20.80 | 362 | 12 | 74 | 3.68 | 4.95 |
>pdb|1hx0A01 YAPQTQSGRTSIVHLFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRD MVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDCQ LVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGEA IKSSEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGSSILTFWDARLY KIAVGFMLAHPYGFTRVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKEVTINADTTCGNDWVCEHRWREIRNMVWFRNVV DG
>pdb|1hx0A01 XYAPQTQSGRTSIVHLFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFR DMVTRCNNVGVRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAWDFNDGKCKTASGGIESYNDPYQVRDC QLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDIKAVLDKLHNLNTNWFPAGSRPFIFQEVIDLGGE AIKSSEYFGNGRVTEFKYGAKLGTVVRKWSGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGSSILTFWDARL YKIAVGFMLAHPYGFTRVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKEVTINADTTCGNDWVCEHRWREIRNMVWFRNV VDG
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"