CATH Domain: 1ht6A01 XML data for domain: 1ht6A01

Molscript image for 1ht6A01
1ht6A01
PDB coordinates for domain 1ht6A01

PDB 1ht6, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.80 Glycosidases Gene3D
3.20.20.80.15
3.20.20.80.15.1
3.20.20.80.15.1.1
3.20.20.80.15.1.1.1
3.20.20.80.15.1.1.1.1

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Segment boundaries for domain 1ht6A01

Chopping figure for domain 1ht6A01
DomainStart PDB ResidueStop PDB Residue
1ht6A01 2 347
1ht6A02 348 404

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.20.20.80.15.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mxgA01 87.26 Pyrococcus furiosusAlpha amylase 3.20.20.80 337 28 89 1.94 2.17
1j0hA02 80.03 NeopullulanaseGeobacillus stearothermophilus 3.20.20.80 326 17 75 3.13 4.17
1eh9A01 77.97 Sulfolobus solfataricusMalto-oligosyltrehalose trehalohydrolase 3.20.20.80 362 14 77 3.24 4.16
1m7xD02 77.62 Starch and sucrose metabolismMetabolic pathways1,4-alpha-glucan branching enzyme [EC:2.4.1.18]Glycogen biosynthetic process1,4-alpha-glucan-branching enzyme 3.20.20.80 359 13 76 3.43 4.46
1r7aA01 73.76 Starch and sucrose metabolismSucrose phosphorylase [EC:2.4.1.7]Sucrose phosphorylaseBifidobacterium adolescentis 3.20.20.80 350 12 68 3.38 4.97
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ht6A01
QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGK
GVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQREL
KEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS
AGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGIPC
IFYDHFFNWGFKDQIAALVAIRKRNG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ht6A01
QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGK
GVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQREL
KEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS
AGMVFDFTTKGILNAAVEGELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGIPC
IFYDHFFNWGFKDQIAALVAIRKRNG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:47

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"