CATH Domain: 1hryA00 XML data for domain: 1hryA00

Molscript image for 1hryA00
1hryA00
PDB coordinates for domain 1hryA00

PDB 1hry, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.30 DNA Binding (I), subunit A
1.10.30.10 DNA Binding (I), subunit A Gene3D
1.10.30.10.3
1.10.30.10.3.1
1.10.30.10.3.1.2
1.10.30.10.3.1.2.3
1.10.30.10.3.1.2.3.1

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Segment boundaries for domain 1hryA00

Chopping figure for domain 1hryA00
DomainStart PDB ResidueStop PDB Residue
1hryA00 3 75

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.10.30.10.3.1.2.3.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2lefA00 86.67 Odontogenesis of dentine-containing toothLymphoid enhancer-binding factor 1Paraxial mesoderm formationRegulation of Wnt receptor signaling pathwayBMP signaling pathway 1.10.30.10 86 29 91 2.56 2.79
1cktA00 86.49 Base excision repairGlycolipid bindingResponse to heatRAGE receptor bindingPositive regulation of neuron projection development 1.10.30.10 71 25 87 2.01 2.30
1k99A00 82.77 Homo sapiensNucleolar transcription factor 1RNA polymerase I transcription factor activityProtein binding 1.10.30.10 91 22 84 3.90 4.61
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1hryA00
DRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1hryA00
VQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"