CATH Domain: 1hqkA00 XML data for domain: 1hqkA00

Molscript image for 1hqkA00
1hqkA00
PDB coordinates for domain 1hqkA00

PDB 1hqk, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.960 Gene3D
3.40.50.960.1
3.40.50.960.1.1
3.40.50.960.1.1.1
3.40.50.960.1.1.1.1
3.40.50.960.1.1.1.1.1

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Segment boundaries for domain 1hqkA00

Chopping figure for domain 1hqkA00
DomainStart PDB ResidueStop PDB Residue
1hqkA00 1 154

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.40.50.960.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2c92A00 93.11 Riboflavin metabolismMetabolic pathwaysRiboflavin synthase beta chain [EC:2.5.1.-]Mycobacterium tuberculosis6,7-dimethyl-8-ribityllumazine synthase 3.40.50.960 147 45 92 0.99 1.07
1kz1C00 92.63 Riboflavin metabolismCytoplasmRiboflavin synthase beta chain [EC:2.5.1.-]NucleusMetabolic pathways 3.40.50.960 151 35 96 2.00 2.07
1c41A00 91.52 Riboflavin metabolismRiboflavin synthase beta chain [EC:2.5.1.-]Magnaporthe griseaMetabolic pathways6,7-dimethyl-8-ribityllumazine synthase 3.40.50.960 165 38 92 3.37 3.63
2obxA00 89.39 Riboflavin metabolismRiboflavin synthase beta chain [EC:2.5.1.-]6,7-dimethyl-8-ribityllumazine synthase 1Mesorhizobium lotiMetabolic pathways 3.40.50.960 150 24 92 3.24 3.49
2q5cA01 79.23 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.2300 97 12 62 2.60 4.13
3iwtA00 77.57 178aa long hypothetical molybdenum cofactor biosynthesis protein BSulfolobus tokodaiiMolybdenum cofactor biosynthesis protein B 3.40.980.10 159 9 74 3.53 4.72
1mkzA00 77.33 Molybdenum cofactor biosynthesis protein BMolybdenum cofactor biosynthesis protein BEscherichia coli K-12 3.40.980.10 167 9 73 3.64 4.94
1kjnA00 77.17 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.10160 148 8 69 3.35 4.82
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1hqkA00
MQIYEGKLTAEGLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGV
LIRGATPHFDYIASEVSKGLANLSLELRKPITFGVITADTLEQAIERAGTKHGNKGWEAALSAIEMANLFKSLR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1hqkA00
MQIYEGKLTAEGLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGV
LIRGATPHFDYIASEVSKGLANLSLELRKPITFGVITADTLEQAIERAGTKHGNKGWEAALSAIEMANLFKSLR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:41

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"