CATH Domain: 1hq8A00 XML data for domain: 1hq8A00

Molscript image for 1hq8A00
1hq8A00
PDB coordinates for domain 1hq8A00

PDB 1hq8, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.19
3.10.100.10.19.1
3.10.100.10.19.1.1
3.10.100.10.19.1.1.1
3.10.100.10.19.1.1.1.1

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Segment boundaries for domain 1hq8A00

Chopping figure for domain 1hq8A00
DomainStart PDB ResidueStop PDB Residue
1hq8A00 110 232

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.10.100.10.19.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bdwA00 90.03 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 34 99 2.21 2.23
1byfA00 86.85 LectinPolyandrocarpa misakiensis 3.10.100.10 123 14 88 2.38 2.69
1h8uB00 85.82 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 15 83 2.04 2.44
1jznA00 85.65 Galactose-specific lectinCrotalus atrox 3.10.100.10 135 21 86 2.53 2.92
1sl6A00 83.49 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 33 72 2.38 3.28
1eslA00 81.81 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 19 67 1.94 2.87
1rjhA00 81.63 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 21 82 2.87 3.50
3fd4A00 81.40 Glycoprotein 42Human herpesvirus 4 (strain B95-8) 3.10.100.10 140 15 82 4.12 4.97
1cwvA05 77.26 InvasinYersinia pseudotuberculosis 3.10.100.10 100 7 65 3.02 4.64
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1hq8A00
GYCGPCPNNWICHRNNCYQFFNEEKTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYHWMGLVQIPANGSWQWEDGSS
LSYNQLTLVEIPKGSCAVYGSSFKAYTEDCANLNTYICMKRAV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1hq8A00
GYCGPCPNNWICHRNNCYQFFNEEKTWNQSQASCLSQNSSLLKIYSKEEQDFLKLVKSYHWMGLVQIPANGSWQWEDGSS
LSYNQLTLVEIPKGSCAVYGSSFKAYTEDCANLNTYICMKRAV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"