CATH Domain: 1ho8A01 XML data for domain: 1ho8A01

Molscript image for 1ho8A01
1ho8A01
PDB coordinates for domain 1ho8A01

PDB 1ho8, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.25 Alpha Horseshoe
1.25.10 Leucine-rich Repeat Variant
1.25.10.10 Leucine-rich Repeat Variant Gene3D
1.25.10.10.10
1.25.10.10.10.1
1.25.10.10.10.1.1
1.25.10.10.10.1.1.1
1.25.10.10.10.1.1.1.1

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Segment boundaries for domain 1ho8A01

Chopping figure for domain 1ho8A01
DomainStart PDB ResidueStop PDB Residue
1ho8A01 2 354
1ho8A02 366 477

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1ho8A01
GATKILMDSTHFNEIRSIIRSRSVAWDALARSEELSEIDASTAKALESILVKKVNGKTLIPLIHLLSTSDNEDCKKSVQN
LIAELLSSDKYGDDTVKFFQEDPKQLEQLFDVSLKGDFQTVLISGFNVVSLLVQNGLHNVKLVEKLLKNNNLINILQNIE
QMDTCYVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDF
LDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQ
ELT
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ho8A01
GSMGATKILMDSTHFNEIRSIIRSRSVAWDALARSEELSEIDASTAKALESILVKKNIGDGLSSSNNAHSGFKVNGKTLI
PLIHLLSTSDNEDCKKSVQNLIAELLSSDKYGDDTVKFFQEDPKQLEQLFDVSLKGDFQTVLISGFNVVSLLVQNGLHNV
KLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHL
GIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNA
LPTVQSLSERKYSDEELRQDISNLKEILENEYQELT
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:21

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:46

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"