CATH Domain: 1hdhA01 XML data for domain: 1hdhA01

Molscript image for 1hdhA01
1hdhA01
PDB coordinates for domain 1hdhA01

PDB 1hdh, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.720 Alkaline Phosphatase, subunit A
3.40.720.10 Alkaline Phosphatase, subunit A Gene3D
3.40.720.10.2
3.40.720.10.2.1
3.40.720.10.2.1.1
3.40.720.10.2.1.1.1
3.40.720.10.2.1.1.1.1

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Segment boundaries for domain 1hdhA01

Chopping figure for domain 1hdhA01
DomainStart PDB ResidueStop PDB Residue
1hdhA01 3 450
1hdhA02 451 527

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.720.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1fsuA01 84.14 LysosomeArylsulfatase B [EC:3.1.6.12]Glycosaminoglycan degradationMetabolic pathwaysLysosomal transport 3.40.720.10 370 28 75 2.26 3.01
1aukA01 82.40 Calcium ion bindingLysosomeArylsulfatase A [EC:3.1.6.8]Arylsulfatase ALysosome 3.40.720.10 383 25 75 3.78 4.98
2qzuA01 79.04 Putative sulfatase yidJBacteroides fragilis 3.40.720.10 351 21 71 3.08 4.29
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1hdhA01
KRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTASTSPTRSMLLTGTDHHIAGIGTMAEALTPELEGK
PGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPAL
YVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARL
KELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGA
LLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHA
FATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1hdhA01
MSKRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTASTXSPTRSMLLTGTDHHIAGIGTMAEALTPEL
EGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGT
PALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERL
ARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGA
EGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAI
SHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:28

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:45

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"