Set cath from cathlist by auto on 05 Mar 2006 19:31
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
CATH Domain: 1hd7A00
1hd7A00
PDB 1hd7, Chain A, Domain 0
| CATH Code | Level Description | Links |
|---|---|---|
 3
| Alpha Beta | |
 3.60
| 4-Layer Sandwich | |
 3.60.10
| Deoxyribonuclease I; Chain A | |
 3.60.10.10
| Gene3D | |
 3.60.10.10.6
| ||
 3.60.10.10.6.1
| ||
 3.60.10.10.6.1.1
| ||
 3.60.10.10.6.1.1.1
| ||
 3.60.10.10.6.1.1.1.1
|
Structural Neighbourhood (2 entries)
There are 2 matching structural neighberhood comparisons for CATH ID 3.60.10.10.6.1.1.1.1 (SIMAX score < 5)
[1]
Displaying entries 1 to 2 (page 1 of 1)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
|
1vybA00 | 84.19 | 3.60.10.10 | 236 | 22 | 83 | 2.57 | 3.10 | |
|
1wduB00 | 78.95 | 3.60.10.10 | 219 | 13 | 78 | 2.97 | 3.77 |
[1]
Displaying entries 1 to 2 (page 1 of 1)
Domain ATOM Sequence
>pdb|1hd7A00 LYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSEGLSHQYWSAPYSGVGLLSRQCP LKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEID LRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSK IRSKALGSDHCPITLYLAL
Domain COMBS Sequence
>pdb|1hd7A00 LYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPS DKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRK PLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLD YFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
Domain History Events (3)
Flow stage update by auto on 05 Mar 2006 19:31
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
Insertion by auto on 05 Mar 2006 15:53
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"
