CATH Domain: 1hc7A01 XML data for domain: 1hc7A01

Molscript image for 1hc7A01
1hc7A01
PDB coordinates for domain 1hc7A01

PDB 1hc7, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.930 BirA Bifunctional Protein; domain 2
3.30.930.10 Bira Bifunctional Protein; Domain 2 Gene3D
3.30.930.10.10
3.30.930.10.10.1
3.30.930.10.10.1.1
3.30.930.10.10.1.1.1
3.30.930.10.10.1.1.1.1

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Segment boundaries for domain 1hc7A01

Chopping figure for domain 1hc7A01
DomainStart PDB ResidueStop PDB Residue
1hc7A01 5 282
1hc7A02 283 386
1hc7A03 404 477

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.30.930.10.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1atiB01 80.12 Aminoacyl-tRNA biosynthesisThermus thermophilus HB8Glycyl-tRNA synthetase [EC:6.1.1.14]Glycine-tRNA ligase activityProtein dimerization activity 3.30.930.10 305 11 81 3.13 3.82
2zt5A01 79.67 Glycine-tRNA ligase activitySoluble fractionProtein dimerization activityHomo sapiensGlycyl-tRNA synthetase 3.30.930.10 325 12 79 2.98 3.77
1kmmA01 78.83 Aminoacyl-tRNA biosynthesisHistidyl-tRNA synthetaseHistidyl-tRNA synthetase [EC:6.1.1.21]Escherichia coli K-12 3.30.930.10 287 10 75 2.97 3.93
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1hc7A01
KGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLFSPELAV
VTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEE
EVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKY
VHTTSWGLSWRFIGAIIMTHGDDRGLVLP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1hc7A01
MAKEKGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKE
AEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQE
GHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAF
DIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLP
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:08

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:45

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"