CATH Domain: 1h8uB00 XML data for domain: 1h8uB00

Molscript image for 1h8uB00
1h8uB00
PDB coordinates for domain 1h8uB00

PDB 1h8u, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.21
3.10.100.10.21.1
3.10.100.10.21.1.1
3.10.100.10.21.1.1.1
3.10.100.10.21.1.1.1.1

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Segment boundaries for domain 1h8uB00

Chopping figure for domain 1h8uB00
DomainStart PDB ResidueStop PDB Residue
1h8uB00 2 117

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.10.100.10.21.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1byfA00 87.00 LectinPolyandrocarpa misakiensis 3.10.100.10 123 18 91 2.64 2.87
1rjhA00 85.73 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 18 88 2.39 2.69
3bdwA00 84.84 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 14 84 2.86 3.38
1eslA00 83.86 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 21 69 1.66 2.39
1sl6A00 82.42 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 24 65 2.13 3.25
3fd4A00 80.71 Glycoprotein 42Human herpesvirus 4 (strain B95-8) 3.10.100.10 140 12 73 2.31 3.14
1f00I03 79.29 Pathogenic Escherichia coli infectionIntiminIntiminProtein bindingEscherichia coli O127:H6 str. E2348/69 3.10.100.10 98 11 71 3.04 4.25
1cwvA05 79.09 InvasinYersinia pseudotuberculosis 3.10.100.10 100 10 72 2.96 4.09
2pf5D00 77.07 Cell-cell signalingHyaluronic acid bindingHomo sapiensTumor necrosis factor-inducible gene 6 proteinSignal transduction 3.10.100.10 91 10 60 2.62 4.34
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1h8uB00
CRYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWA
AHQPWSRGGHCVALCTRGGYWRRAHCLRRLPFICSY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1h8uB00
TCRYLLVRSLQTFSQAWFTCRRCYRGNLVSIHNFNINYRIQCSVSALNQGQVWIGGRITGSGRCRRFQWVDGSRWNFAYW
AAHQPWSRGGHCVALCTRGGYWRRAHCLRRLPFICSY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"