CATH Domain: 1h6tA01 XML data for domain: 1h6tA01

Molscript image for 1h6tA01
1h6tA01
PDB coordinates for domain 1h6tA01

PDB 1h6t, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.80 Alpha-Beta Horseshoe
3.80.10 Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
3.80.10.10 Ribonuclease Inhibitor Gene3D
3.80.10.10.6
3.80.10.10.6.1
3.80.10.10.6.1.1
3.80.10.10.6.1.1.1
3.80.10.10.6.1.1.1.1

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Segment boundaries for domain 1h6tA01

Chopping figure for domain 1h6tA01
DomainStart PDB ResidueStop PDB Residue
1h6tA01 31 245
1h6tA02 246 321

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.80.10.10.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1h6uA02 88.56 Listeria monocytogenesInternalin H 3.80.10.10 162 38 75 0.84 1.11
3cvrA01 81.14 Shigella flexneriE3 ubiquitin-protein ligase ipaH3 3.80.10.10 231 16 76 3.26 4.25
1dceA03 79.44 Rattus norvegicusRab geranylgeranyltransferase activityProtein geranylgeranyltransferase type II [EC:2.5.1.60]Geranylgeranyl transferase type-2 subunit alpha 3.80.10.10 136 20 59 2.31 3.91
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1h6tA01
GPLGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKL
TDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDT
LSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1h6tA01
GPLGSETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKL
TDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDT
LSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:21

Cut based on decision in database "DomChop" on "cathdb"