CATH Domain: 1h4vB02 XML data for domain: 1h4vB02

Molscript image for 1h4vB02
1h4vB02
PDB coordinates for domain 1h4vB02

PDB 1h4v, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.800 Gene3D
3.40.50.800.5
3.40.50.800.5.1
3.40.50.800.5.1.1
3.40.50.800.5.1.1.1
3.40.50.800.5.1.1.1.1

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Segment boundaries for domain 1h4vB02

Chopping figure for domain 1h4vB02
DomainStart PDB ResidueStop PDB Residue
1h4vB01 2 323
1h4vB02 324 418

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.40.50.800.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1httA02 91.69 Aminoacyl-tRNA biosynthesisHistidyl-tRNA synthetaseHistidyl-tRNA synthetase [EC:6.1.1.21]Escherichia coli K-12 3.40.50.800 98 29 94 1.41 1.49
1qe0A02 90.40 Aminoacyl-tRNA biosynthesisHistidyl-tRNA synthetaseHistidyl-tRNA synthetase [EC:6.1.1.21]Staphylococcus aureus 3.40.50.800 91 25 94 1.88 1.98
1atiB02 86.18 Aminoacyl-tRNA biosynthesisThermus thermophilus HB8Glycyl-tRNA synthetase [EC:6.1.1.14]Glycine-tRNA ligase activityProtein dimerization activity 3.40.50.800 112 26 83 2.62 3.12
2zt5A03 82.39 Glycine-tRNA ligase activityProtein dimerization activitySoluble fractionHomo sapiensGlycyl-tRNA synthetase 3.40.50.800 121 17 78 2.84 3.62
1p5dX02 76.71 Amino sugar and nucleotide sugar metabolismGalactose metabolismFructose and mannose metabolismMetabolic pathwaysStarch and sucrose metabolism 3.40.120.10 78 12 64 2.45 3.82
1nbwB00 74.45 Klebsiella pneumoniaePutative uncharacterized protein 3.40.50.10150 113 11 76 3.32 4.31
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1h4vB02
PEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGE
QVRLSREEVPGYLLQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1h4vB02
PEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGE
QVRLSREEVPGYLLQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:17

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 16:43

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"