CATH Domain: 1h3oB00 XML data for domain: 1h3oB00

Molscript image for 1h3oB00
1h3oB00
PDB coordinates for domain 1h3oB00

PDB 1h3o, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.20 Histone, subunit A
1.10.20.10 Histone, subunit A Gene3D
1.10.20.10.17
1.10.20.10.17.1
1.10.20.10.17.1.1
1.10.20.10.17.1.1.1
1.10.20.10.17.1.1.1.1

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Segment boundaries for domain 1h3oB00

Chopping figure for domain 1h3oB00
DomainStart PDB ResidueStop PDB Residue
1h3oB00 55 128

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 1.10.20.10.17.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1bh9A00 82.68 Basal transcription factorsTranscription factor TFIID complexTranscription initiation factor TFIID subunit D11Protein C-terminus bindingTranscription initiation factor TFIID subunit 13 1.10.20.10 45 15 61 1.72 2.78
1jfiA00 79.89 Sequence-specific DNA binding transcription factor activityTranscription corepressor activityHomo sapiensNegative regulation of transcription from RNA polymerase II promoterDr1-associated corepressor 1.10.20.10 63 9 81 2.97 3.64
1jfiB00 78.90 Protein Dr1Transcription corepressor activityHomo sapiensNegative regulation of transcription from RNA polymerase II promoter 1.10.20.10 135 16 52 1.38 2.62
1kx5A00 77.56 Systemic lupus erythematosusHistone H3.2Xenopus laevisHistone H3 1.10.20.10 135 12 52 1.71 3.25
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1h3oB00
HVLTKKKLQDLVREVDPNEQLDEDVEELLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNWI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1h3oB00
GSHXVLTKKKLQDLVREVDPNEQLDEDVEEXLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLERQWNXWI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"