CATH Domain: 1gzhB01 XML data for domain: 1gzhB01

Molscript image for 1gzhB01
1gzhB01
PDB coordinates for domain 1gzhB01

PDB 1gzh, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.10190 Gene3D
3.40.50.10190.5
3.40.50.10190.5.1
3.40.50.10190.5.1.1
3.40.50.10190.5.1.1.1
3.40.50.10190.5.1.1.1.1

[top]
Segment boundaries for domain 1gzhB01

Chopping figure for domain 1gzhB01
DomainStart PDB ResidueStop PDB Residue
1gzhB01 1724 1850
1gzhB02 1851 1971

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.50.10190.5.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1cdzA00 85.73 DNA repair protein XRCC1Homo sapiensProtein binding 3.40.50.10190 96 13 90 3.20 3.54
1imoA00 78.46 DNA ligase 3Reciprocal meiotic recombinationDNA bindingHomo sapiensProtein binding 3.40.50.10190 88 14 71 3.15 4.38
[1]
Displaying entries 1 to 2 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1gzhB01
LNKTLFLGYAFLLTMATTSDKLASRSPPFNKQYTESQLRAGAGYILEDFNTAYQCLLIADQHCRTRKYFLCLASGIPCVS
HVWVHDSCHANQLQNYRNYLLPA
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1gzhB01
LNKTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCL
LIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPA
BLAST against CATH

[top]
Domain History Events (2)

Insertion by lewis on 18 Jan 2007 19:17

Rechopping chains just before release v3.1.0 in order to fix missing fragments.

Domain assigned by lewis on 18 Jan 2007 19:17

Reassigning this domain to its previous classification as part of fragment fixing process in preparation for release v3.1.0.