CATH Domain: 1gz2A00 XML data for domain: 1gz2A00

Molscript image for 1gz2A00
1gz2A00
PDB coordinates for domain 1gz2A00

PDB 1gz2, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.100 Mannose-Binding Protein A; Chain A
3.10.100.10 Mannose-Binding Protein A, subunit A Gene3D
3.10.100.10.6
3.10.100.10.6.1
3.10.100.10.6.1.1
3.10.100.10.6.1.1.1
3.10.100.10.6.1.1.1.1

Segment boundaries for domain 1gz2A00

Chopping figure for domain 1gz2A00
DomainStart PDB ResidueStop PDB Residue
1gz2A00 4 142

Structural Neighbourhood (19 entries)

There are 19 matching structural neighberhood comparisons for CATH ID 3.10.100.10.6.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 19 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jznA00 90.92 Galactose-specific lectinCrotalus atrox 3.10.100.10 135 27 94 1.63 1.73
1wmzA00 89.36 Cucumaria echinataLectin CEL-I, N-acetyl-D-galactosamine-specific C-type 3.10.100.10 140 21 92 1.80 1.95
1h8uB00 88.13 Bone marrow proteoglycanHomo sapiensBone marrow proteoglycanExtracellular regionSugar binding 3.10.100.10 116 25 82 1.86 2.25
1tn3A00 87.86 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 135 20 90 2.15 2.37
2h2tB01 87.36 Positive regulation of nitric-oxide synthase 2 biosynthetic processIntegral to plasma membraneHematopoietic cell lineagePositive regulation of nitric-oxide synthase activityPositive regulation of killing of cells of another organism 3.10.100.10 116 22 83 1.50 1.80
1kza100 85.89 Rattus norvegicusMannose bindingProtein self-associationMannose-binding lectinMannose-binding protein C 3.10.100.10 115 17 80 1.81 2.25
1hq8A00 85.48 Positive regulation of interferon-gamma productionPositive regulation of natural killer cell mediated cytotoxicityPositive regulation of nitric oxide biosynthetic processMHC class I protein bindingNatural killer cell activation 3.10.100.10 123 22 84 2.20 2.62
3hupA00 85.41 CD69 antigenIntegral to plasma membraneEarly activation antigen CD69Homo sapiensTransmembrane receptor activity 3.10.100.10 114 22 79 2.04 2.56
1g1tA01 85.41 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 119 16 79 1.86 2.33
3g8kA00 85.07 Mus musculusPlasma membraneLectin-related NK cell receptor LY49L1 3.10.100.10 127 19 86 3.47 3.99
1byfA00 85.03 LectinPolyandrocarpa misakiensis 3.10.100.10 123 12 81 2.23 2.72
1pwbC00 84.46 Negative regulation of T cell proliferationProtein bindingInnate immune responseLung alveolus developmentEndocytic vesicle 3.10.100.10 150 16 80 2.42 3.02
3bdwA00 84.13 Killer cell lectin-like receptor subfamily D, member 1Natural killer cell mediated cytotoxicityNatural killer cells antigen CD94Antigen processing and presentationGraft-versus-host disease 3.10.100.10 123 19 86 2.80 3.25
1rtm100 84.13 Calcium ion bindingMannose bindingRattus norvegicusProtein homodimerization activityExtracellular space 3.10.100.10 149 12 81 2.50 3.08
1eslA00 83.06 Response to tumor necrosis factorCoated pitHeterophilic cell-cell adhesionPerinuclear region of cytoplasmPhospholipase binding 3.10.100.10 157 15 70 1.70 2.40
1sl6A00 82.90 Integral to plasma membraneCell-cell recognitionVirion attachment to host cell surface receptorVirion bindingHomo sapiens 3.10.100.10 168 18 72 2.14 2.97
1rjhA00 81.89 Skeletal system developmentHomo sapiensTetranectinProtein binding 3.10.100.10 118 20 81 2.99 3.65
3fd4A00 80.71 Glycoprotein 42Human herpesvirus 4 (strain B95-8) 3.10.100.10 140 15 83 2.78 3.33
1cwvA05 75.88 InvasinYersinia pseudotuberculosis 3.10.100.10 100 9 65 2.82 4.32
Displaying entries 1 to 19 (page 1 of 1)


Domain ATOM Sequence

>pdb|1gz2A00
GCGPGWVPTPGGCLGFFSRELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNARGGDGSGEGADGRVWIGLHRPAG
SRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEEAFTSWAARPCTERNAFVCKAAA    

Domain COMBS Sequence

>pdb|1gz2A00
DPDGCGPGWVPTPGGCLGFFSRELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLNAXRGGDGSGEGADGRVWIGLH
RPAGSRSWRWSDGTAPRFASWHRTAKARRGGRCAALRDEEAFTSWAARPCTERNAFVCKAAA    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:13

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"