CATH Domain: 1gz0B02 XML data for domain: 1gz0B02

Molscript image for 1gz0B02
1gz0B02
PDB coordinates for domain 1gz0B02

PDB 1gz0, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.1280 Alpha/beta knot
3.40.1280.10 Gene3D
3.40.1280.10.14
3.40.1280.10.14.1
3.40.1280.10.14.1.1
3.40.1280.10.14.1.1.1
3.40.1280.10.14.1.1.1.1

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Segment boundaries for domain 1gz0B02

Chopping figure for domain 1gz0B02
DomainStart PDB ResidueStop PDB Residue
1gz0B01 -1 76
1gz0B02 77 243

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.1280.10.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1k3rA01 78.46 Hypothetical proteinMethanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.1280.10 191 11 74 3.64 4.86
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1gz0B02
GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN
LARTRLQEENIWIVGTAGEADHTLYQSKTGRLALVGAEGEGRRLTREHCDELISIPAGSVSSLNVSVATGICLFEAVRQR
S
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gz0B02
GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN
LARTXRXLQEENIWIVGTAGEADHTLYQSKXTGRLALVXGAEGEGXRRLTREHCDELISIPXAGSVSSLNVSVATGICLF
EAVRQRS
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:08

Assigning to "3.40.1280.10" based on similarity with "1gz0H02" (NWSI: 96.4071856287425, NWO: 100, SPS: 96.32, SPO: 100, RMSD: 0.95)

Flow stage update by auto on 28 Apr 2006 17:49

NW result present for Domain "1gz0B02"

Flow stage update by auto on 28 Apr 2006 17:43

All required files are present for Domain "1gz0B02"

Flow stage update by auto on 27 Apr 2006 17:30

Beginning processing for Domain "1gz0B02"

Insertion by auto on 05 Mar 2006 23:21

Cut based on decision in database "DomChop" on "cathdb"