CATH Domain: 1gxrA00 XML data for domain: 1gxrA00

Molscript image for 1gxrA00
1gxrA00
PDB coordinates for domain 1gxrA00

PDB 1gxr, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.130 7 Propellor
2.130.10 Methylamine Dehydrogenase; Chain H
2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase Gene3D
2.130.10.10.4
2.130.10.10.4.1
2.130.10.10.4.1.1
2.130.10.10.4.1.1.1
2.130.10.10.4.1.1.1.1

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Segment boundaries for domain 1gxrA00

Chopping figure for domain 1gxrA00
DomainStart PDB ResidueStop PDB Residue
1gxrA00 434 770

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.130.10.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1erjC00 85.76 General transcriptional repressor activityTranscriptional repressor complexGlucose repression regulatory protein TUP1Negative regulation of transcriptionSaccharomyces cerevisiae 2.130.10.10 357 22 89 4.18 4.68
1l0qA01 84.40 Methanosarcina mazeiORF492 2.130.10.10 295 14 78 2.00 2.56
1p22A02 84.12 Ubiquitin-dependent protein catabolic processF-box/WD repeat-containing protein 1AHomo sapiensProtein bindingSignal transduction 2.130.10.10 295 17 82 1.96 2.39
1nr0A01 83.95 Caenorhabditis elegansOvipositionLocomotionPositive regulation of locomotionNematode larval development 2.130.10.10 298 17 83 2.44 2.91
1nr0A02 82.51 Caenorhabditis elegansOvipositionLocomotionPositive regulation of locomotionNematode larval development 2.130.10.10 312 11 83 2.56 3.07
1ri6A00 82.06 Pentose phosphate pathwayMetabolic pathways6-phosphogluconolactonase [EC:3.1.1.31]6-phosphogluconolactonase activity6-phosphogluconolactonase 2.130.10.10 333 10 82 2.93 3.54
1pguB02 80.66 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 323 10 85 3.73 4.37
1pguB01 78.07 Mating projection tipResponse to osmotic stressNucleusActin bindingActin filament depolymerization 2.130.10.10 279 8 79 3.29 4.16
1sqjB01 74.69 Oligoxyloglucan reducing end-specific cellobiohydrolaseGeotrichum sp. M128 2.130.10.140 322 5 83 3.89 4.65
2vdrA00 74.23 Integrin alpha 2BIdentical protein bindingPathways in cancerHematopoietic cell lineageDilated cardiomyopathy 2.130.10.130 452 9 64 3.06 4.72
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1gxrA00
DYFQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDIS
HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPRIKAELTSSAPACYALAISPDSKVCFSCCSD
GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG
MESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIV
TGSGDKKATVYEVIY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gxrA00
DYFQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDIS
HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC
SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLA
VGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKY
IVTGSGDKKATVYEVIY
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:11

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"