CATH Domain: 1gveA00 XML data for domain: 1gveA00

Molscript image for 1gveA00
1gveA00
PDB coordinates for domain 1gveA00

PDB 1gve, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.100 NADP-dependent oxidoreductase Gene3D
3.20.20.100.3
3.20.20.100.3.1
3.20.20.100.3.1.1
3.20.20.100.3.1.1.1
3.20.20.100.3.1.1.1.1

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Segment boundaries for domain 1gveA00

Chopping figure for domain 1gveA00
DomainStart PDB ResidueStop PDB Residue
1gveA00 4 327

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.20.20.100.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lqaA00 86.63 Protein tasEscherichia coli K-12 3.20.20.100 346 21 86 2.37 2.73
3eauA00 86.31 Rattus norvegicusVoltage-gated potassium channel subunit beta-2Potassium voltage-gated channel, Shaker-related subfamily A, beta member 2Protein heterooligomerizationProtein binding 3.20.20.100 327 22 91 2.69 2.93
1pyfA00 82.69 Protein iolSBacillus subtilisMyo-inositol catabolism protein IolS [EC:1.1.1.-] 3.20.20.100 309 24 87 3.42 3.90
1ur3M00 80.87 Escherichia coli K-12Oxidoreductase ydhF 3.20.20.100 290 16 82 3.61 4.38
1mi3A00 80.82 Candida tenuisNAD(P)H-dependent D-xylose reductase 3.20.20.100 319 15 82 3.95 4.81
3krbA00 80.64 Giardia lamblia ATCC 50803Aldose reductase 3.20.20.100 303 18 78 3.18 4.07
2wzmA00 80.34 Uncharacterized oxidoreductase MSMEG_2407Mycobacterium smegmatis str. MC2 155 3.20.20.100 274 18 79 3.96 4.95
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1gveA00
ARPATVLGAMEMGRRMDVTSSSRSVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGKTLK
PADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTV
YQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMDRYWKEEHFNGIAL
VEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNLALVEEGPLEPAVVDAFDQAWNLVAHECP
NYFR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gveA00
MSQARPATVLGAMEMGRRMDVTSSSRSVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGK
TLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIM
PTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMDRYWKEEHFNG
IALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNLALVEEGPLEPAVVDAFDQAWNLVAH
ECPNYFR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:57

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"