CATH Domain: 1gs5A00 XML data for domain: 1gs5A00

Molscript image for 1gs5A00
1gs5A00
PDB coordinates for domain 1gs5A00

PDB 1gs5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.1160 Carbamate kinase
3.40.1160.10 Gene3D
3.40.1160.10.1
3.40.1160.10.1.1
3.40.1160.10.1.1.1
3.40.1160.10.1.1.1.1
3.40.1160.10.1.1.1.1.1

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Segment boundaries for domain 1gs5A00

Chopping figure for domain 1gs5A00
DomainStart PDB ResidueStop PDB Residue
1gs5A00 1 258

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.1160.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2a1fC00 80.58 Pyrimidine metabolismHaemophilus influenzaeUridylate kinaseUridylate kinase [EC:2.7.4.22] 3.40.1160.10 237 13 81 3.37 4.14
2va1B00 78.82 Pyrimidine metabolismUreaplasma parvumUridylate kinaseUridylate kinase [EC:2.7.4.22] 3.40.1160.10 235 11 82 3.42 4.12
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1gs5A00
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGAL
AGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHA
EQLPALFNGMPMGTRILA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gs5A00
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGAL
AGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHA
EQLPALFNGMPMGTRILA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:52

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"