CATH Domain: 1gqvA00 XML data for domain: 1gqvA00

Molscript image for 1gqvA00
1gqvA00
PDB coordinates for domain 1gqvA00

PDB 1gqv, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.130 P-30 Protein
3.10.130.10 P-30 Protein Gene3D
3.10.130.10.2
3.10.130.10.2.1
3.10.130.10.2.1.1
3.10.130.10.2.1.1.1
3.10.130.10.2.1.1.1.1

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Segment boundaries for domain 1gqvA00

Chopping figure for domain 1gqvA00
DomainStart PDB ResidueStop PDB Residue
1gqvA00 0 134

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.10.130.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2op2A00 88.20 Bos taurusPancreatic ribonuclease [EC:3.1.27.5]Ribonuclease pancreaticProtein binding 3.10.130.10 124 35 85 2.17 2.55
1eicA00 87.87 Bos taurusPancreatic ribonuclease [EC:3.1.27.5]Ribonuclease pancreaticProtein binding 3.10.130.10 124 35 86 2.29 2.64
2vq8A00 86.01 3.10.130.10 128 21 82 3.50 4.22
1agiA00 85.46 Receptor bindingPositive regulation of protein secretionActin bindingExtracellular spaceAngiogenin-1 3.10.130.10 125 23 82 3.39 4.09
1yv4A00 83.45 Rana pipiensProtein P-30 3.10.130.10 103 24 73 2.60 3.55
2p7sA00 82.92 Rana pipiensAmphinase-2 3.10.130.10 107 24 74 2.72 3.64
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1gqvA00
MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVP
LIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1gqvA00
MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVP
LIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:51

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:14

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"